Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 0.0e+00 1200.3 618 100.0
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 0.0e+00 1113.6 618 91.7
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 0.0e+00 1103.6 618 90.6
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 0.0e+00 1099.3 618 90.1
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 0.0e+00 1097.4 618 90.3
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 0.0e+00 1095.9 618 90.1
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 0.0e+00 1089.7 618 89.2
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 0.0e+00 1088.9 618 89.2
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 0.0e+00 1084.7 617 89.6
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 0.0e+00 1081.6 618 89.3
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 0.0e+00 1080.1 618 88.3
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 0.0e+00 1079.7 618 87.9
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 0.0e+00 1078.5 628 87.7
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 0.0e+00 1078.5 618 88.5
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 0.0e+00 1075.1 625 88.2
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 1.3e-311 1072.4 618 88.2
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 5.5e-310 1067.0 615 88.0
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 5.5e-310 1067.0 615 87.6
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 1.2e-309 1065.8 618 87.5
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 4.6e-309 1063.9 618 87.2
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 1.5e-307 1058.9 619 87.4
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 2.1e-306 1055.0 616 87.7
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 8.1e-306 1053.1 618 85.8
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 4.0e-305 1050.8 618 86.1
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 1.2e-304 1049.3 618 86.7
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 2.0e-304 1048.5 618 86.4
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 4.5e-304 1047.3 642 83.6
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 7.6e-304 1046.6 619 85.9
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 1.1e-302 1042.7 618 85.8
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 1.9e-302 1042.0 618 86.7
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 3.5e-301 1037.7 618 85.1
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 4.6e-301 1037.3 618 85.0
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 2.3e-300 1035.0 618 85.0
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 4.3e-299 1030.8 657 81.4
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 2.1e-298 1028.5 685 79.7
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 2.1e-298 1028.5 618 84.6
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 3.7e-298 1027.7 617 84.3
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 3.1e-297 1024.6 621 83.7
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 5.3e-297 1023.8 620 84.0
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 2.0e-296 1021.9 620 85.0
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 5.9e-296 1020.4 624 83.5
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 1.3e-295 1019.2 619 83.7
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 1.6e-293 1012.3 618 83.8
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 3.6e-293 1011.1 618 82.4
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 3.9e-292 1007.7 619 82.9
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 3.9e-292 1007.7 619 82.9
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 1.6e-290 1002.3 617 82.5
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 1.4e-289 999.2 617 82.2
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 3.1e-289 998.0 617 82.0
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 6.9e-289 996.9 753 71.3
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 1.3e-287 992.6 617 81.8
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 2.2e-287 991.9 623 81.4
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 2.9e-287 991.5 619 81.3
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 3.8e-287 991.1 616 81.3
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 4.2e-286 987.6 617 81.2
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 1.2e-285 986.1 617 81.2
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 3.6e-285 984.6 610 81.3
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 3.6e-285 984.6 617 81.0
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 1.8e-284 982.2 650 78.3
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 3.0e-284 981.5 618 79.9
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 2.6e-283 978.4 611 80.9
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 3.3e-283 978.0 614 80.3
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 5.7e-283 977.2 645 77.2
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 5.7e-283 977.2 614 80.1
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 2.9e-279 964.9 617 80.4
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 3.6e-277 958.0 629 78.1
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 1.0e-276 956.4 618 78.8
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 6.7e-276 953.7 618 77.0
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 6.7e-276 953.7 542 88.7
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 4.8e-274 947.6 615 79.0
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 9.1e-273 943.3 615 76.7
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 1.6e-272 942.6 615 76.6
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 8.5e-271 936.8 615 77.7
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 9.4e-270 933.3 618 76.9
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 3.0e-268 928.3 616 76.1
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 1.7e-266 922.5 575 80.3
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 1.4e-265 919.5 583 81.0
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 1.4e-265 919.5 615 75.6
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 5.3e-265 917.5 633 75.0
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 3.5e-264 914.8 617 75.4
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 7.7e-264 913.7 618 74.8
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 2.5e-262 908.7 517 88.4
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 3.2e-262 908.3 618 76.1
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 4.2e-262 907.9 517 88.2
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 2.1e-261 905.6 639 73.4
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 1.7e-258 896.0 576 80.4
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 4.8e-258 894.4 600 74.8
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.1e-257 893.3 624 76.0
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 2.3e-255 885.6 615 72.8
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 2.5e-254 882.1 602 74.1
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 2.5e-246 855.5 616 72.4
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 3.6e-245 851.7 514 85.8
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 1.2e-240 836.6 616 68.5
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 4.4e-227 791.6 615 62.9
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 7.1e-225 784.3 447 89.3
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 2.1e-224 782.7 558 74.6
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 2.6e-219 765.8 531 75.5
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 7.6e-219 764.2 469 81.2
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 3.4e-211 738.8 620 59.5
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 4.0e-204 715.3 615 59.7
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 3.7e-189 665.6 649 52.4
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 2.5e-182 642.9 362 90.9
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 5.9e-171 605.1 342 92.1
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.9e-169 600.1 494 67.2
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 3.9e-167 592.4 360 84.7
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 2.4e-164 583.2 617 51.2
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 2.0e-158 563.5 392 77.0
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 8.2e-157 558.1 617 48.6
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 9.1e-140 501.5 364 68.7
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 4.7e-128 462.6 598 46.8
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 1.4e-124 451.1 511 46.0
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 3.0e-122 443.4 375 67.2
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 3.6e-120 436.4 282 83.7
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 3.6e-104 383.3 458 52.2
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 3.3e-81 307.0 171 89.5
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 2.8e-80 303.9 175 86.3
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 5.3e-71 273.1 188 70.7
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.9e-65 254.6 149 91.3
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 7.7e-62 242.7 134 90.3
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 1.7e-61 241.5 144 88.2
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 2.0e-54 218.0 117 89.7
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 9.4e-52 209.1 122 86.9
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 2.7e-51 207.6 151 71.5
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 7.7e-46 189.5 106 86.8
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 2.2e-45 188.0 105 84.8
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 3.2e-44 184.1 105 91.4
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.6e-43 181.8 135 68.9
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 5.7e-41 173.3 178 54.5
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 4.0e-34 150.6 154 59.1
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 2.6e-33 147.9 94 77.7
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.0e-29 136.0 74 93.2
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 1.0e-26 125.9 106 55.7
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 2.0e-25 121.7 58 94.8
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 3.1e-23 114.4 86 68.6
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 3.5e-22 110.9 115 59.1
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 3.8e-21 107.5 59 78.0
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 3.8e-21 107.5 59 78.0
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 1.1e-20 105.9 76 68.4
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 1.5e-20 105.5 59 79.7
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 1.5e-20 105.5 59 79.7
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 1.2e-19 102.4 54 92.6
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 4.1e-15 87.4 50 76.0
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 4.6e-14 84.0 53 67.9
MD05G1162500 Malus domestica HOM05D004954 ORTHO05D006267 4.3e-12 77.4 80 53.8
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 5.6e-12 77.0 43 83.7
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 8.0e-11 73.2 48 77.1
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 1.4e-10 72.4 51 58.8
QL09p053081 Quercus lobata HOM05D002786 ORTHO05D030058 4.4e-09 67.4 54 66.7
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.3e-08 65.9 38 76.3
MD05G1162600 Malus domestica HOM05D004954 ORTHO05D006267 6.0e-06 57.0 32 90.6
Hma1.2p1_0717F.1_g208260 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 7.8e-06 56.6 34 76.5


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