Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.2e-152 543.1 269 100.0
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.8e-114 415.2 271 77.5
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 7.1e-113 411.0 271 76.4
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 9.2e-113 410.6 258 78.7
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 4.6e-112 408.3 269 75.1
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 6.0e-112 407.9 269 75.1
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 7.8e-112 407.5 274 77.4
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.3e-111 406.0 269 75.5
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 5.1e-111 404.8 269 74.7
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.1e-110 403.7 269 74.0
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.7e-106 389.8 300 68.0
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 2.9e-106 389.0 283 71.0
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 2.9e-106 389.0 267 71.2
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.1e-105 387.1 286 71.3
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 3.2e-105 385.6 270 71.9
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.2e-105 385.2 275 71.6
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 5.4e-105 384.8 277 71.5
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 9.3e-105 384.0 318 64.8
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.7e-104 382.5 319 63.3
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.5e-104 382.1 271 72.3
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 7.8e-104 380.9 269 70.6
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 6.6e-103 377.9 272 70.6
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 6.6e-103 377.9 276 71.4
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.9e-102 376.3 303 66.3
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.3e-102 375.6 278 68.0
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.6e-101 373.2 268 70.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 2.1e-101 372.9 276 69.2
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 4.8e-101 371.7 268 69.0
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 6.2e-101 371.3 275 69.1
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 8.1e-101 370.9 270 70.4
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 8.1e-101 370.9 269 68.4
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.8e-100 369.8 274 69.3
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.3e-100 368.2 269 69.5
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 6.9e-100 367.9 275 69.1
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 9.0e-100 367.5 269 71.7
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.5e-99 366.7 270 68.5
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.0e-99 366.3 274 68.2
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.6e-99 365.9 266 68.8
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.6e-99 365.9 266 68.8
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.6e-99 365.9 273 68.1
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 3.4e-99 365.5 266 68.8
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 3.4e-99 365.5 275 68.7
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 7.6e-99 364.4 280 67.9
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 9.9e-99 364.0 276 68.1
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.3e-98 363.6 274 67.9
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 3.8e-98 362.1 286 66.1
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 6.4e-98 361.3 276 65.9
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 8.4e-98 360.9 264 67.8
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.4e-97 360.1 266 67.7
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 1.4e-97 360.1 280 66.1
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 2.4e-97 359.4 275 68.0
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 4.2e-97 358.6 268 68.7
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 9.3e-97 357.5 268 64.9
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.6e-96 356.7 272 65.8
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 2.7e-96 355.9 352 56.5
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.0e-95 354.0 296 64.5
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 3.0e-95 352.4 282 66.7
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 5.1e-95 351.7 254 69.3
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 6.7e-95 351.3 271 66.1
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.1e-94 350.5 270 67.8
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.9e-94 349.7 267 64.4
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 5.6e-94 348.2 226 75.2
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 5.6e-94 348.2 314 60.2
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.3e-93 347.1 274 64.6
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 2.8e-93 345.9 272 68.8
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 4.8e-93 345.1 270 67.0
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 4.8e-93 345.1 267 65.9
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.2e-91 340.5 304 60.9
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 3.4e-91 339.0 273 64.5
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 9.9e-91 337.4 266 65.4
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.2e-90 336.3 269 64.3
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.8e-90 335.5 273 63.0
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 3.2e-89 332.4 211 73.5
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.6e-88 330.1 228 72.4
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 2.3e-87 326.2 251 67.7
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.9e-87 325.5 264 62.9
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.5e-86 323.6 274 63.1
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.9e-86 323.2 224 71.9
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.3e-85 320.5 276 64.1
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.8e-85 319.3 266 63.5
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.0e-82 310.8 176 83.0
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 4.2e-81 305.4 231 67.5
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 3.5e-80 302.4 203 73.4
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 9.6e-78 294.3 184 77.7
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 3.7e-77 292.4 227 67.0
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 8.2e-77 291.2 191 73.8
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 3.1e-76 289.3 189 74.1
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 6.9e-76 288.1 190 75.8
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 6.9e-76 288.1 249 59.4
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.5e-75 287.0 193 76.2
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 3.2e-73 279.3 268 54.9
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 6.7e-71 271.6 189 68.8
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 6.7e-71 271.6 227 59.0
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 8.2e-69 264.6 195 69.2
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.1e-68 264.2 265 56.6
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.4e-68 263.8 266 51.1
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 9.1e-68 261.2 215 58.1
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 3.2e-65 252.7 287 53.3
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 6.7e-63 245.0 274 46.7
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 5.3e-60 235.3 129 82.9
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 6.1e-56 221.9 221 45.7
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 3.9e-55 219.2 170 56.5
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 1.1e-54 217.6 235 47.2
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 3.1e-52 209.5 136 77.9
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.6e-51 207.2 165 57.0
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 4.4e-46 189.1 184 58.7
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 5.7e-46 188.7 191 58.1
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 4.0e-39 166.0 189 40.2
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.7e-32 142.5 107 69.2
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 6.1e-32 142.1 221 41.2
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.0e-22 110.5 56 85.7
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.7e-21 107.5 63 81.0
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 3.2e-20 103.2 59 76.3
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 7.0e-20 102.1 90 54.4
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 1.6e-19 100.9 100 55.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.1e-17 94.7 80 61.2
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 4.3e-17 92.8 102 52.0
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 1.5e-14 84.3 91 47.3
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 4.1e-12 76.3 89 47.2
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 7.0e-12 75.5 78 53.8
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 2.6e-06 57.0 64 51.6
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 5.8e-06 55.8 85 37.6


User provided reference genes

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