Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 3.1e-232 808.1 415 100.0
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 7.0e-160 567.8 415 73.7
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 2.0e-159 566.2 416 73.8
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 5.0e-158 561.6 383 77.0
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 1.5e-157 560.1 398 75.9
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 7.2e-157 557.8 422 72.7
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 2.7e-156 555.8 411 73.7
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 6.8e-155 551.2 392 75.8
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 3.4e-154 548.9 382 76.2
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 3.4e-154 548.9 386 75.9
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 3.4e-154 548.9 415 71.1
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 4.4e-154 548.5 414 72.0
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 9.8e-154 547.4 409 71.9
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 1.7e-153 546.6 355 78.9
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.2e-153 546.2 416 72.6
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 2.2e-153 546.2 416 72.6
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 2.8e-153 545.8 407 72.5
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 1.1e-152 543.9 417 72.7
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 1.1e-152 543.9 416 71.6
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 1.4e-152 543.5 362 77.9
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 1.4e-152 543.5 386 74.9
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.4e-152 543.5 416 72.4
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 2.4e-152 542.7 362 77.9
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.1e-152 542.3 417 72.4
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 4.1e-152 542.0 418 71.3
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 2.0e-151 539.7 360 78.3
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 2.0e-151 539.7 360 78.3
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 2.7e-151 539.3 362 77.1
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 2.7e-151 539.3 362 77.1
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 3.5e-151 538.9 385 73.5
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 4.5e-151 538.5 363 77.7
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 5.9e-151 538.1 362 77.3
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 7.7e-151 537.7 392 73.2
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 1.0e-150 537.3 385 73.2
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.3e-150 537.0 363 77.7
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 2.2e-150 536.2 362 77.1
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 2.2e-150 536.2 362 77.1
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 6.5e-150 534.6 381 74.0
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 1.5e-149 533.5 420 70.5
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.5e-149 531.6 397 72.3
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 9.4e-149 530.8 412 69.4
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 2.1e-148 529.6 364 77.5
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 2.1e-148 529.6 387 72.4
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 2.7e-148 529.3 397 71.8
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 8.0e-148 527.7 356 77.5
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 3.0e-147 525.8 343 80.2
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 6.8e-147 524.6 377 73.7
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 8.8e-147 524.2 389 72.8
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 1.2e-146 523.9 375 73.6
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 2.0e-146 523.1 362 76.8
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 1.7e-145 520.0 382 73.3
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 2.8e-145 519.2 317 83.9
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.1e-144 517.3 406 70.0
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 1.8e-144 516.5 405 68.9
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 7.0e-144 514.6 346 76.9
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 1.6e-143 513.5 449 64.6
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 2.7e-143 512.7 370 73.8
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 4.5e-143 511.9 398 70.4
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 1.3e-142 510.4 389 70.7
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.1e-141 507.3 388 70.9
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 4.3e-141 505.4 408 68.4
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 1.6e-140 503.4 421 67.7
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 3.6e-140 502.3 410 68.8
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 1.4e-139 500.4 404 68.6
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 1.8e-139 500.0 349 75.4
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 4.0e-139 498.8 414 67.6
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 4.0e-139 498.8 397 68.8
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 6.8e-139 498.0 349 75.4
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 1.5e-138 496.9 361 74.0
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 2.0e-138 496.5 360 74.2
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 2.2e-137 493.0 391 70.6
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 2.9e-137 492.7 363 74.1
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 1.1e-136 490.7 424 64.9
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 1.8e-136 490.0 385 69.9
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 2.4e-136 489.6 392 68.6
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 1.3e-134 483.8 370 71.4
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 1.3e-134 483.8 351 74.6
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 3.0e-134 482.6 366 72.4
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 3.3e-133 479.2 368 71.5
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 3.3e-133 479.2 406 66.7
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 8.9e-131 471.1 372 68.5
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 2.0e-130 469.9 347 69.7
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 5.8e-130 468.4 390 66.4
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 4.1e-128 462.2 296 81.1
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 1.3e-126 457.2 417 63.1
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 1.7e-126 456.8 365 66.6
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 3.0e-126 456.1 366 69.1
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 4.0e-123 445.7 320 73.1
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 3.4e-122 442.6 310 76.8
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 5.8e-122 441.8 285 80.7
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 3.2e-120 436.0 456 57.9
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 2.1e-119 433.3 326 69.6
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 4.9e-113 412.1 390 60.5
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 5.6e-109 398.7 291 71.8
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 1.9e-104 383.6 317 64.7
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.7e-95 353.2 239 75.7
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.9e-80 303.9 221 73.8
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 2.5e-80 303.5 325 49.5
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 5.5e-80 302.4 295 63.1
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 1.6e-79 300.8 396 47.2
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 7.9e-79 298.5 316 50.6
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 7.9e-79 298.5 201 75.6
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 5.7e-77 292.4 282 62.4
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 3.1e-75 286.6 286 58.7
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 3.4e-74 283.1 335 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 1.0e-70 271.6 231 59.3
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 7.4e-69 265.4 514 38.5
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 9.7e-69 265.0 901 29.0
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.4e-64 251.1 158 79.7
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 2.6e-53 213.8 143 76.9
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 3.2e-48 196.8 157 68.8
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 9.1e-43 178.7 124 73.4
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.9e-40 171.0 104 87.5
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 4.8e-36 156.4 177 51.4
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 2.9e-33 147.1 325 33.8
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 6.8e-22 109.4 82 70.7
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 2.5e-16 90.9 260 29.6
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 6.8e-14 82.8 81 56.8
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 1.2e-13 82.0 343 27.1
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 1.2e-13 82.0 45 88.9
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 2.6e-13 80.9 49 79.6
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 9.8e-13 79.0 48 79.2
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 3.9e-09 67.0 74 54.1
MD05G1159400 Malus domestica HOM05D006407 ORTHO05D008079 1.2e-07 62.0 56 55.4


User provided reference genes

Program Settings