Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1245 Cannabis sativa HOM05D029001 ORTHO05D011714 1.6e-216 755.7 376 100.0
CANSAT01G1970 Cannabis sativa HOM05D029001 ORTHO05D011714 1.0e-146 523.9 259 99.2
CANSAT01G1525 Cannabis sativa HOM05D029001 ORTHO05D011714 2.5e-100 369.8 287 63.1
CANSAT11G1502 Cannabis sativa HOM05D029001 ORTHO05D011714 9.5e-15 85.5 177 33.3
Nn1g06823 Nelumbo nucifera HOM05D000231 ORTHO05D000132 8.1e-14 82.4 252 28.6
Sabra11G0027800 Salix brachista HOM05D000231 ORTHO05D000132 1.5e-12 78.2 239 27.6
Potri.004G032100 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.0e-12 77.8 237 26.2
Potri.011G040900 Populus trichocarpa HOM05D000231 ORTHO05D000132 9.8e-12 75.5 253 26.1
VMungo1080G1678 Vigna mungo HOM05D000231 ORTHO05D011714 1.3e-11 75.1 218 28.9
CiPaw.09G156700 Carya illinoinensis HOM05D000231 ORTHO05D000132 2.9e-11 73.9 195 32.3
Sabra04G0018300 Salix brachista HOM05D000231 ORTHO05D000132 3.7e-11 73.6 207 28.0
Actinidia12472 Actinidia chinensis HOM05D000231 ORTHO05D000132 8.3e-11 72.4 218 28.0
PSO832G3486 Papaver somniferum HOM05D000231 ORTHO05D000132 1.4e-10 71.6 233 28.3
Rhsim08G0120700 Rhododendron simsii HOM05D030015 ORTHO05D000060 1.4e-10 71.6 293 25.9
TAR624G0649 Trochodendron aralioides HOM05D000231 ORTHO05D000132 1.9e-10 71.2 258 26.4
Nn1g03831 Nelumbo nucifera HOM05D000231 ORTHO05D000132 3.2e-10 70.5 257 26.1
Manes.16G019191 Manihot esculenta HOM05D000231 ORTHO05D000132 4.1e-10 70.1 248 26.6
CSS0014358 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 9.2e-10 68.9 193 28.5
Sabra11G0027600 Salix brachista HOM05D000231 ORTHO05D000132 1.2e-09 68.6 206 27.7
Potri.011G040500 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.1e-09 67.8 202 29.7
TAR626G0142 Trochodendron aralioides HOM05D000231 ORTHO05D000132 2.1e-09 67.8 258 25.2
CDE02G4340 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 2.7e-09 67.4 232 25.9
Cpa.g.sc27.141 Carica papaya HOM05D000231 ORTHO05D000132 3.5e-09 67.0 200 25.5
Cfa000336 Carpinus fangiana HOM05D000231 ORTHO05D000132 3.5e-09 67.0 246 26.4
FAN09G1693 Fragaria x ananassa HOM05D000231 ORTHO05D000132 3.5e-09 67.0 219 27.9
COL.COLO4_31634 Corchorus olitorius HOM05D000231 ORTHO05D000132 4.6e-09 66.6 214 28.0
Gorai.005G206700 Gossypium raimondii HOM05D000231 ORTHO05D000132 4.6e-09 66.6 234 26.1
Ciclev10017833m.g Citrus clementina HOM05D000231 ORTHO05D000132 7.8e-09 65.9 238 25.2
Medtr2g081170 Medicago truncatula HOM05D000231 ORTHO05D011714 1.0e-08 65.5 169 32.0
Atru.chr10.2033 Acer truncatum HOM05D000231 ORTHO05D000132 1.3e-08 65.1 247 24.7
Duzib192G0055 Durio zibethinus HOM05D000231 ORTHO05D000132 1.3e-08 65.1 218 25.7
RcHm_v2.0_Chr5g0005771 Rosa chinensis HOM05D000231 ORTHO05D000132 1.7e-08 64.7 212 24.5
Lalb_Chr20g0110061 Lupinus albus HOM05D000231 ORTHO05D011714 3.0e-08 63.9 214 29.0
CSS0045736 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 3.9e-08 63.5 165 29.1
FAN09G4210 Fragaria x ananassa HOM05D000231 ORTHO05D000132 6.6e-08 62.8 249 26.5
Lalb_Chr18g0060011 Lupinus albus HOM05D000231 ORTHO05D000132 6.6e-08 62.8 185 26.5
Eucgr.A01768 Eucalyptus grandis HOM05D000231 ORTHO05D000132 1.1e-07 62.0 182 30.2
GSVIVG01003674001 Vitis vinifera HOM05D000231 ORTHO05D000132 1.5e-07 61.6 203 28.6
Atru.chr6.3091 Acer truncatum HOM05D000231 ORTHO05D000132 1.9e-07 61.2 180 26.1
FAN05G3528 Fragaria x ananassa HOM05D000231 ORTHO05D000132 7.3e-07 59.3 248 25.8
Gohir.A11G038550 Gossypium hirsutum HOM05D000231 ORTHO05D000132 7.3e-07 59.3 206 26.2
Sabra19G0134700 Salix brachista HOM05D000231 ORTHO05D000132 7.3e-07 59.3 179 30.2
ATR1132G108 Amborella trichopoda HOM05D000231 ORTHO05D000132 9.5e-07 58.9 222 27.5
Lsat_1_v5_gn_7_105920 Lactuca sativa HOM05D000231 ORTHO05D021410 9.5e-07 58.9 223 28.3
TPR.G18166 Trifolium pratense HOM05D000231 ORTHO05D011714 2.1e-06 57.8 177 26.6
TPR.G32872 Trifolium pratense HOM05D000231 ORTHO05D011714 2.1e-06 57.8 161 28.6
Dinv08356 Davidia involucrata HOM05D000231 ORTHO05D000132 2.8e-06 57.4 193 24.9
Lj2C279T1 Lonicera japonica HOM05D000231 ORTHO05D000132 2.8e-06 57.4 268 23.9
Psat5g247440 Pisum sativum HOM05D000231 ORTHO05D011714 2.8e-06 57.4 177 27.7
Actinidia24051 Actinidia chinensis HOM05D000231 ORTHO05D000132 4.7e-06 56.6 314 22.9
FvH4_3g03720 Fragaria vesca HOM05D000231 ORTHO05D000132 4.7e-06 56.6 212 23.6
FAN25G0621 Fragaria x ananassa HOM05D000231 ORTHO05D000132 8.1e-06 55.8 256 22.3
Psat5g247480 Pisum sativum HOM05D000231 ORTHO05D011714 8.1e-06 55.8 250 27.2
SalBow7G0486 Salvia bowleyana HOM05D000231 ORTHO05D000132 8.1e-06 55.8 203 22.7


User provided reference genes

Program Settings