Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 5.2e-84 314.3 154 100.0
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.4e-73 278.9 137 100.0
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 1.5e-70 269.6 137 97.1
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 2.5e-70 268.9 141 95.7
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 8.6e-31 137.5 138 52.9
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 7.3e-30 134.4 150 50.0
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 2.8e-29 132.5 139 50.4
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 2.4e-28 129.4 139 49.6
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 4.0e-28 128.6 150 49.3
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 5.2e-28 128.3 156 42.9
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 5.2e-28 128.3 143 49.7
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 8.9e-28 127.5 151 45.0
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 1.2e-27 127.1 147 49.7
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 1.5e-27 126.7 147 46.9
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 3.4e-27 125.6 134 49.3
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 5.8e-27 124.8 163 46.6
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 7.6e-27 124.4 158 46.2
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 9.9e-27 124.0 137 48.9
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.2e-26 122.9 109 56.0
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 2.9e-26 122.5 112 53.6
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 3.8e-26 122.1 110 56.4
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 3.8e-26 122.1 140 47.1
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.9e-26 121.7 170 41.2
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 4.9e-26 121.7 159 40.3
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 8.4e-26 120.9 119 49.6
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.1e-25 120.6 153 44.4
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.4e-25 120.2 156 41.7
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.9e-25 119.8 156 44.2
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 2.4e-25 119.4 137 48.2
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 3.2e-25 119.0 158 40.5
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.2e-25 119.0 169 39.6
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 3.2e-25 119.0 156 41.0
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 5.4e-25 118.2 139 48.2
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 7.1e-25 117.9 103 55.3
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 9.3e-25 117.5 125 49.6
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 9.3e-25 117.5 139 47.5
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 9.3e-25 117.5 152 42.1
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 9.3e-25 117.5 132 47.0
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.6e-24 116.7 137 47.4
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 2.1e-24 116.3 150 46.7
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 2.7e-24 115.9 100 59.0
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 4.6e-24 115.2 107 53.3
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 6.0e-24 114.8 92 58.7
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 7.8e-24 114.4 124 50.0
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 7.8e-24 114.4 160 42.5
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.0e-23 114.0 110 54.5
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.0e-23 114.0 152 43.4
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.0e-23 114.0 136 44.1
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.0e-23 114.0 145 45.5
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.3e-23 113.6 131 49.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-23 113.6 112 51.8
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 1.7e-23 113.2 128 47.7
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 2.3e-23 112.8 110 50.0
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 3.9e-23 112.1 147 46.9
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 5.1e-23 111.7 141 46.1
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 6.6e-23 111.3 100 55.0
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 8.7e-23 110.9 106 50.0
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 8.7e-23 110.9 106 51.9
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.1e-22 110.5 104 52.9
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.1e-22 110.5 105 54.3
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.5e-22 110.2 134 44.8
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.9e-22 109.8 102 54.9
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 2.5e-22 109.4 107 52.3
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 2.5e-22 109.4 148 42.6
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 2.5e-22 109.4 122 50.8
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.3e-22 109.0 109 51.4
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 4.3e-22 108.6 125 47.2
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 4.3e-22 108.6 146 45.9
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 5.6e-22 108.2 105 52.4
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 7.3e-22 107.8 109 52.3
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.3e-21 107.1 151 39.7
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.6e-21 106.7 88 60.2
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.8e-21 105.9 107 50.5
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 4.8e-21 105.1 91 53.8
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 4.8e-21 105.1 134 43.3
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 4.8e-21 105.1 125 47.2
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 4.8e-21 105.1 125 47.2
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 4.8e-21 105.1 139 42.4
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 8.1e-21 104.4 130 43.8
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 1.1e-20 104.0 130 43.8
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.8e-20 103.2 137 44.5
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 2.4e-20 102.8 130 43.1
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.4e-20 102.8 141 44.0
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 3.1e-20 102.4 130 43.1
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 9.0e-20 100.9 141 41.8
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 1.2e-19 100.5 108 50.9
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.5e-19 100.1 125 44.8
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.5e-19 100.1 101 50.5
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 2.0e-19 99.8 136 39.7
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 5.8e-19 98.2 102 50.0
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 5.8e-19 98.2 102 50.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.3e-18 97.1 136 39.7
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 4.9e-18 95.1 126 40.5
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.4e-17 93.6 118 44.9
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 5.4e-17 91.7 93 52.7
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.4e-12 77.0 81 46.9
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.4e-12 76.3 90 46.7
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.2e-11 73.9 90 41.1
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 4.9e-10 68.6 65 47.7
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.9e-09 66.6 147 34.0
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 3.0e-07 59.3 139 28.1
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 6.7e-07 58.2 65 40.0


User provided reference genes

Program Settings