Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.5e-47 191.8 99 100.0
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 7.5e-28 127.1 100 76.0
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 1.7e-27 125.9 102 69.6
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 2.2e-27 125.6 93 75.3
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.1e-26 123.2 93 75.3
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 3.2e-26 121.7 92 72.8
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 1.2e-25 119.8 92 72.8
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.6e-25 119.4 92 73.9
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.6e-25 119.4 93 75.3
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.6e-25 119.4 93 75.3
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.0e-25 119.0 96 72.9
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.5e-25 118.2 93 74.2
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.5e-25 118.2 93 75.3
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.0e-24 116.7 93 72.0
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.3e-24 116.3 97 71.1
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.3e-24 116.3 97 71.1
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.3e-24 116.3 93 72.0
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 3.0e-24 115.2 92 71.7
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.3e-23 111.7 92 69.6
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 4.3e-23 111.3 93 71.0
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 5.6e-23 110.9 93 69.9
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 9.5e-23 110.2 97 68.0
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.2e-22 109.8 93 65.6
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.2e-22 109.8 93 65.6
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.2e-22 109.8 94 69.1
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 1.6e-22 109.4 93 64.5
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.6e-22 109.4 101 62.4
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.7e-22 107.8 92 67.4
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.7e-22 107.8 92 67.4
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 4.7e-22 107.8 92 67.4
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 4.7e-22 107.8 92 67.4
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 6.2e-22 107.5 92 65.2
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 6.2e-22 107.5 87 70.1
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 6.2e-22 107.5 87 70.1
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 8.0e-22 107.1 93 64.5
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.3e-21 105.5 92 63.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 3.1e-21 105.1 93 63.4
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 4.0e-21 104.8 87 67.8
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 5.2e-21 104.4 92 65.2
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 6.8e-21 104.0 91 65.9
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 6.8e-21 104.0 92 62.0
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 8.9e-21 103.6 92 65.2
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 8.9e-21 103.6 99 62.6
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.2e-20 103.2 93 63.4
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.5e-20 102.8 86 67.4
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.5e-20 102.8 92 64.1
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.0e-20 102.4 96 58.3
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 3.4e-20 101.7 93 62.4
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 4.4e-20 101.3 93 62.4
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 5.8e-20 100.9 96 62.5
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 1.7e-19 99.4 92 63.0
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 2.2e-19 99.0 94 61.7
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.9e-19 98.6 88 63.6
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 4.9e-19 97.8 96 58.3
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 6.4e-19 97.4 94 63.8
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 8.3e-19 97.1 93 63.4
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 2.4e-18 95.5 93 59.1
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 3.2e-18 95.1 97 60.8
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 4.1e-18 94.7 84 69.0
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 1.2e-17 93.2 72 76.4
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.6e-17 92.8 93 58.1
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.6e-17 92.8 92 56.5
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.3e-16 89.7 97 61.9
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 2.3e-16 89.0 92 57.6
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 3.9e-16 88.2 93 58.1
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 6.6e-16 87.4 94 58.5
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 8.6e-16 87.0 66 74.2
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.5e-15 86.3 92 53.3
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.6e-14 82.8 88 59.1
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 6.2e-14 80.9 95 48.4
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 6.2e-14 80.9 88 55.7
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 8.1e-14 80.5 66 68.2
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.1e-13 80.1 83 61.4
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 8.3e-11 70.5 99 51.5
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 2.1e-09 65.9 84 54.8
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.0e-08 63.5 50 70.0
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 1.1e-07 60.1 89 49.4


User provided reference genes

Program Settings