Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-101 373.2 199 100.0
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 8.2e-66 254.2 197 68.0
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-65 253.4 198 73.7
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 2.9e-63 245.7 188 69.1
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 5.9e-56 221.5 197 69.0
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 3.7e-50 202.2 125 73.6
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 4.7e-45 185.3 152 60.5
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.3e-39 167.2 158 53.2
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 6.5e-39 164.9 132 56.1
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 8.5e-39 164.5 120 61.7
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 2.5e-38 162.9 147 52.4
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 3.6e-37 159.1 117 59.8
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 5.5e-30 135.2 143 44.8
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 1.8e-28 130.2 116 51.7
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 1.8e-28 130.2 117 51.3
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 6.8e-28 128.3 116 50.9
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 1.2e-27 127.5 158 45.6
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-27 127.1 117 51.3
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 2.6e-27 126.3 119 50.4
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 5.7e-27 125.2 148 45.9
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-25 120.6 148 40.5
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-25 119.8 131 47.3
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 4.1e-25 119.0 113 48.7
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-24 116.3 148 39.9
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 7.8e-24 114.8 154 45.5
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 7.8e-24 114.8 154 45.5
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.7e-23 113.6 104 57.7
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.7e-23 113.6 120 46.7
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-23 112.8 107 53.3
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 2.9e-23 112.8 125 48.0
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 6.6e-23 111.7 168 38.1
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.6e-23 111.7 118 46.6
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 8.6e-23 111.3 148 37.8
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 1.1e-22 110.9 81 60.5
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-22 110.2 153 38.6
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.3e-22 109.4 118 45.8
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 4.3e-22 109.0 134 44.0
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 5.6e-22 108.6 127 42.5
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 5.6e-22 108.6 134 43.3
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 7.3e-22 108.2 154 39.0
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 9.5e-22 107.8 143 39.9
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 9.5e-22 107.8 136 42.6
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.6e-21 107.1 127 41.7
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-21 107.1 113 46.0
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-21 106.7 99 49.5
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 2.8e-21 106.3 105 48.6
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 4.7e-21 105.5 118 39.0
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 4.7e-21 105.5 131 40.5
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 6.1e-21 105.1 137 43.8
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 6.1e-21 105.1 118 44.9
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 8.0e-21 104.8 134 42.5
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-20 104.4 148 41.9
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-20 104.4 123 42.3
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-20 104.0 111 45.9
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.4e-20 104.0 118 44.1
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-20 103.2 122 42.6
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-20 102.8 122 42.6
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-20 102.8 138 42.0
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-20 102.8 138 42.0
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-20 102.4 134 41.8
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-20 102.4 118 44.9
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-20 102.1 138 42.0
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 5.2e-20 102.1 97 49.5
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 5.2e-20 102.1 97 49.5
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 5.2e-20 102.1 97 49.5
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 5.2e-20 102.1 97 49.5
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 6.8e-20 101.7 100 47.0
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 6.8e-20 101.7 138 42.0
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 6.8e-20 101.7 132 40.2
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 8.9e-20 101.3 123 43.1
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-20 101.3 138 41.3
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-20 101.3 138 41.3
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.2e-19 100.9 115 45.2
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-19 100.5 138 41.3
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-19 100.5 138 41.3
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 2.0e-19 100.1 119 44.5
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-19 99.8 122 41.8
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 4.4e-19 99.0 138 39.1
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-19 99.0 150 39.3
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 5.7e-19 98.6 138 39.1
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 5.7e-19 98.6 145 39.3
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 5.7e-19 98.6 118 44.9
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-19 98.2 132 38.6
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-18 97.4 127 40.9
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-18 97.1 137 38.0
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-18 96.7 132 39.4
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 2.9e-18 96.3 106 42.5
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.7e-18 95.9 116 44.0
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-18 95.5 132 39.4
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 8.3e-18 94.7 117 39.3
AUR62018245 Chenopodium quinoa HOM05D002760 ORTHO05D003169 8.3e-18 94.7 65 66.2
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 8.3e-18 94.7 137 37.2
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-17 94.4 154 37.7
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.4e-17 94.0 150 37.3
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 2.4e-17 93.2 117 41.0
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-17 92.8 136 41.2
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.2e-17 92.8 139 39.6
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-17 92.0 151 40.4
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 7.0e-17 91.7 102 45.1
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 7.0e-17 91.7 106 43.4
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-16 90.9 99 46.5
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-16 90.9 103 43.7
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-16 90.1 93 45.2
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-16 89.7 115 41.7
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 2.7e-16 89.7 105 45.7
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 3.5e-16 89.4 119 40.3
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-16 89.4 107 45.8
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 5.9e-16 88.6 122 38.5
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-15 87.8 137 34.3
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 1.7e-15 87.0 151 36.4
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 1.7e-15 87.0 47 74.5
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 3.9e-15 85.9 151 33.8
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 6.6e-15 85.1 82 50.0
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 8.6e-15 84.7 108 42.6
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 3.3e-14 82.8 52 69.2
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 2.8e-13 79.7 108 41.7
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 6.8e-12 75.1 65 49.2
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 1.5e-11 73.9 58 53.4
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-11 72.8 67 47.8
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-11 71.6 67 49.3
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-10 69.7 83 44.6
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.1e-09 67.8 63 47.6
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 5.4e-09 65.5 76 42.1
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 5.4e-09 65.5 60 50.0
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 7.0e-09 65.1 88 43.2
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-07 61.2 118 32.2
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-07 61.2 114 36.0
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-07 60.5 54 50.0
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-07 59.3 62 48.4
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 1.5e-06 57.4 80 40.0
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 3.3e-06 56.2 54 46.3


User provided reference genes

Program Settings