Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 7.7e-127 457.2 242 100.0
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 9.8e-106 387.1 242 85.5
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 2.4e-104 382.5 242 83.1
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 1.0e-102 377.1 242 82.2
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 8.6e-102 374.0 243 82.3
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 1.1e-101 373.6 243 82.3
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 2.5e-101 372.5 242 81.8
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 2.5e-101 372.5 242 82.2
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 4.3e-101 371.7 242 81.8
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 7.3e-101 370.9 242 80.6
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 7.3e-101 370.9 242 81.8
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 7.3e-101 370.9 241 82.2
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 9.5e-101 370.5 242 81.0
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.2e-100 370.2 242 81.4
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 6.2e-100 367.9 242 80.2
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 8.1e-100 367.5 242 80.2
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 1.1e-99 367.1 242 80.6
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.4e-99 366.7 242 79.8
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 1.8e-99 366.3 243 81.1
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 1.2e-98 363.6 244 80.3
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 3.4e-98 362.1 242 77.7
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 4.4e-98 361.7 242 80.6
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 4.4e-98 361.7 242 79.3
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 5.8e-98 361.3 242 78.5
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 9.9e-98 360.5 242 78.9
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 9.9e-98 360.5 242 79.3
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 2.2e-97 359.4 242 78.9
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 3.7e-97 358.6 242 78.5
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 6.4e-97 357.8 242 79.3
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.9e-96 356.3 244 78.7
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 4.1e-96 355.1 242 78.9
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.6e-95 353.2 242 76.0
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 2.7e-95 352.4 242 76.0
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 3.5e-95 352.1 242 77.7
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 3.5e-95 352.1 242 76.0
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 6.0e-95 351.3 283 70.0
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.0e-94 350.5 242 77.3
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 3.0e-94 349.0 244 77.5
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 3.9e-94 348.6 242 77.3
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 3.9e-94 348.6 242 76.0
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 5.1e-94 348.2 243 78.2
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 6.6e-94 347.8 242 75.6
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.1e-93 347.1 242 75.6
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.5e-93 346.7 242 76.9
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 3.3e-93 345.5 232 76.7
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 9.6e-93 344.0 242 75.6
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 1.2e-92 343.6 221 81.9
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 1.6e-92 343.2 243 74.5
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 1.6e-92 343.2 242 73.1
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 2.8e-92 342.4 244 75.0
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 3.6e-92 342.0 242 76.0
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 4.7e-92 341.7 242 75.2
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 4.7e-92 341.7 237 76.4
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.1e-91 340.5 243 74.9
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 1.1e-91 340.5 244 74.6
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 4.0e-91 338.6 243 73.3
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 3.4e-90 335.5 242 73.1
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 7.6e-90 334.3 245 73.1
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 2.2e-89 332.8 221 77.8
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 3.8e-89 332.0 243 72.0
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 4.9e-89 331.6 238 76.1
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 4.9e-89 331.6 239 76.2
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 4.9e-89 331.6 243 71.6
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 6.4e-89 331.3 243 72.8
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 1.4e-88 330.1 222 79.7
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 2.4e-88 329.3 242 74.8
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 3.2e-88 328.9 242 70.7
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 5.4e-88 328.2 233 74.7
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 9.3e-88 327.4 239 74.9
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 4.6e-87 325.1 242 69.0
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 6.0e-87 324.7 229 73.8
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 6.0e-87 324.7 197 87.3
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 7.8e-87 324.3 243 72.0
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 1.0e-86 323.9 242 69.4
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.3e-86 323.6 243 71.2
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 1.7e-86 323.2 242 69.4
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 2.3e-86 322.8 242 69.0
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 3.0e-86 322.4 242 69.0
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 3.0e-86 322.4 242 69.8
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 3.9e-86 322.0 196 85.7
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 5.1e-86 321.6 243 71.6
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 8.7e-86 320.9 242 69.0
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 8.7e-86 320.9 242 69.0
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 1.1e-85 320.5 243 68.7
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 1.5e-85 320.1 242 68.6
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.9e-85 319.7 242 69.0
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 1.3e-84 317.0 242 68.2
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 2.1e-84 316.2 242 67.8
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 2.1e-84 316.2 196 83.2
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 2.8e-84 315.8 242 66.9
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 2.8e-84 315.8 242 66.9
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.8e-84 315.8 203 82.8
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.8e-84 315.8 242 67.4
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.6e-84 315.5 203 82.3
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 4.8e-84 315.1 244 69.3
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 6.2e-84 314.7 224 74.1
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 6.2e-84 314.7 203 81.8
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 6.2e-84 314.7 291 61.2
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 8.1e-84 314.3 245 70.2
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 1.4e-83 313.5 243 69.5
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.4e-83 312.8 203 81.8
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 2.4e-83 312.8 243 71.2
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 2.4e-83 312.8 243 70.8
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 5.3e-83 311.6 242 66.1
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 6.9e-83 311.2 246 70.7
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 9.0e-83 310.8 229 71.2
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 9.0e-83 310.8 243 68.7
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 1.2e-82 310.5 247 66.4
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 1.2e-82 310.5 243 68.7
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 5.8e-82 308.1 245 66.9
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 7.6e-82 307.8 196 81.1
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 1.7e-81 306.6 245 66.9
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 2.9e-81 305.8 281 64.4
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 3.8e-81 305.4 258 65.9
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 1.1e-80 303.9 196 78.6
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 1.1e-80 303.9 196 81.6
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 4.2e-80 302.0 229 69.9
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 9.3e-80 300.8 279 62.4
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 9.3e-80 300.8 258 65.5
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 2.1e-79 299.7 196 81.1
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 2.1e-79 299.7 287 60.6
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 3.5e-79 298.9 198 77.8
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 4.6e-79 298.5 244 66.4
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 2.3e-78 296.2 238 68.5
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 3.0e-78 295.8 245 65.7
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 7.3e-77 291.2 245 64.1
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.3e-73 280.4 180 82.8
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 7.9e-71 271.2 196 70.4
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 1.3e-70 270.4 175 80.0
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 1.3e-68 263.8 243 61.7
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 6.5e-65 251.5 221 64.7
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 8.2e-60 234.6 188 65.4
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 1.2e-58 230.7 224 59.8
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.0e-58 229.9 196 65.8
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 9.3e-56 221.1 135 84.4
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 8.7e-54 214.5 155 72.9
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 2.2e-49 199.9 155 66.5
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 5.9e-42 175.3 168 60.7
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 2.2e-41 173.3 131 68.7
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 3.8e-41 172.6 149 63.1
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 1.4e-38 164.1 112 75.0
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 2.5e-32 143.3 210 40.0
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 5.5e-32 142.1 238 45.4
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 2.6e-29 133.3 235 40.0
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 4.8e-28 129.0 207 35.7
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.2e-26 124.4 236 40.7
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 6.5e-25 118.6 217 33.2
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 1.1e-24 117.9 99 63.6
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 5.7e-21 105.5 75 72.0
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 1.8e-19 100.5 187 33.7
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 5.4e-19 99.0 178 32.0
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.0e-17 94.7 179 43.0
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 1.8e-14 84.0 63 69.8
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 1.1e-11 74.7 65 58.5
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 1.2e-10 71.2 64 62.5
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 3.3e-08 63.2 223 29.1


User provided reference genes

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