Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2541.9 1273 100.0
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2219.1 1266 87.0
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2209.9 1267 86.5
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2205.3 1267 86.5
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2204.5 1266 86.7
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1266 86.3
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2197.5 1267 86.4
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2196.0 1268 85.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2195.2 1266 85.7
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2190.6 1269 86.1
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2189.8 1266 86.3
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2188.7 1266 86.3
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2188.7 1260 86.1
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2186.0 1267 85.6
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2181.4 1267 84.8
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1266 85.7
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2179.8 1268 84.9
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2179.4 1268 85.1
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2179.1 1260 86.0
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2176.4 1268 84.7
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2175.2 1268 85.2
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2175.2 1261 86.1
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2174.4 1268 85.2
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2174.1 1268 85.6
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2173.3 1268 84.7
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1267 84.8
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2169.4 1268 84.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1267 84.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1266 84.7
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2157.9 1267 84.0
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2157.5 1268 83.9
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2152.1 1267 83.8
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2150.9 1266 85.0
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2148.6 1271 83.6
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2147.9 1267 83.4
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1268 84.5
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2143.6 1268 83.2
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1267 83.4
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1268 83.0
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2138.6 1266 84.0
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2137.8 1272 83.1
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1266 83.6
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1266 82.5
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2135.1 1265 83.4
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2134.8 1266 82.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1266 84.0
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2133.6 1266 82.7
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2132.5 1274 83.0
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2132.5 1266 82.5
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2132.5 1266 82.7
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1266 82.5
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2129.8 1265 83.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2129.8 1268 82.8
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1268 82.9
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2129.0 1263 83.0
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2128.2 1266 82.5
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1274 82.7
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1266 82.4
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2125.9 1268 82.4
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1266 82.4
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1269 82.3
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2123.6 1268 82.2
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1266 82.4
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2121.3 1268 82.5
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2117.0 1266 82.9
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2116.7 1265 82.6
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2114.3 1239 84.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2114.3 1267 82.9
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2112.4 1266 82.2
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2111.3 1266 82.2
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2109.7 1249 83.6
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2107.0 1268 82.4
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2106.3 1267 82.6
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2102.8 1268 81.9
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2099.7 1269 81.8
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2099.3 1267 82.1
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2098.2 1267 81.9
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2097.4 1269 82.1
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2097.4 1268 81.6
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2097.4 1268 81.7
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2086.2 1249 82.8
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2084.7 1274 81.7
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2081.2 1207 85.8
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2079.7 1263 82.1
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2064.3 1268 80.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2060.8 1268 80.0
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2049.6 1267 81.7
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2036.2 1268 79.6
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2035.4 1266 79.0
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2035.0 1267 79.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2009.6 1270 78.2
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2009.6 1268 79.0
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2002.3 1266 79.7
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1943.3 1160 83.1
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1920.2 1265 75.8
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1889.0 1268 73.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1874.0 1272 74.0
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1860.9 1281 72.4
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1828.1 1191 77.0
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1822.8 1244 73.2
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1820.8 1069 83.0
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1814.7 1266 71.0
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1784.6 1089 81.2
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1760.0 1267 71.7
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1759.6 1268 71.5
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1742.6 1130 78.1
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1608.2 963 81.7
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1538.9 1049 73.2
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1536.5 1322 60.7
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1377.1 813 83.0
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1337.8 1267 59.2
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1307.4 1338 53.1
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1296.6 1390 52.2
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1233.0 725 83.9
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1149.4 1012 61.9
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1100.1 810 71.1
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.8e-265 919.1 571 80.4
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.3e-260 904.0 1251 41.4
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.3e-253 879.0 502 87.1
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-221 773.9 655 60.5
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.2e-220 770.4 528 74.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.7e-196 689.9 455 77.6
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.8e-182 642.5 389 84.1
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 7.9e-130 469.5 359 67.1
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 2.8e-119 434.5 313 73.8
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 3.6e-106 391.0 270 73.7
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 7.0e-78 297.0 479 41.3
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 9.2e-70 270.0 169 75.7
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.3e-68 266.2 169 75.1
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.0e-68 265.0 169 75.1
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.8e-63 248.1 138 89.9
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.2e-58 233.0 234 56.4
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 9.9e-48 196.8 116 81.0
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 6.9e-41 174.1 152 65.8
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.8e-40 171.0 91 89.0
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.2e-37 163.3 182 54.4
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 1.6e-29 136.3 99 63.6
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.2e-24 120.2 104 59.6


User provided reference genes

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