Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 6.6e-114 414.1 212 100.0
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 5.1e-74 281.6 212 72.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 8.7e-74 280.8 219 70.3
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.5e-73 280.0 216 72.7
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 3.3e-73 278.9 213 73.2
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.3e-73 278.9 219 71.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 4.3e-73 278.5 212 72.2
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 4.3e-73 278.5 212 72.2
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.3e-73 278.5 216 67.6
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 9.6e-73 277.3 216 68.1
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 9.6e-73 277.3 223 67.3
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.7e-72 275.4 217 68.2
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.0e-70 269.6 214 69.2
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 2.0e-70 269.6 223 67.7
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.6e-70 269.2 216 68.1
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 3.4e-70 268.9 235 66.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 5.8e-70 268.1 221 67.0
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.7e-69 266.5 215 68.8
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.2e-69 266.2 214 67.8
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 2.9e-69 265.8 220 65.5
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 2.9e-69 265.8 229 65.5
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.8e-69 265.4 220 68.2
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 4.9e-69 265.0 222 65.8
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 8.4e-69 264.2 215 67.9
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.1e-68 263.8 212 67.9
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.5e-68 262.7 219 67.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.2e-68 261.9 213 67.1
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 4.2e-68 261.9 214 67.3
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.2e-67 260.4 220 66.4
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.2e-67 260.4 225 65.8
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 2.1e-67 259.6 215 65.6
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.7e-67 259.2 214 67.8
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 3.5e-67 258.8 213 67.1
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 3.5e-67 258.8 218 64.7
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 3.5e-67 258.8 213 68.1
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 6.0e-67 258.1 218 63.8
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.0e-66 257.3 214 67.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.3e-66 256.9 218 65.1
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.8e-66 256.5 220 64.1
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.0e-66 255.8 220 65.0
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 3.0e-66 255.8 212 67.0
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 6.7e-66 254.6 233 62.7
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.1e-65 253.8 219 63.5
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.1e-65 253.8 220 64.5
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.9e-65 253.1 213 63.4
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.9e-65 253.1 214 64.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.5e-65 252.7 213 65.3
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 3.3e-65 252.3 214 64.0
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 4.3e-65 251.9 217 64.5
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 7.4e-65 251.1 215 64.2
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.4e-65 251.1 182 72.5
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.4e-65 251.1 201 66.7
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.6e-65 250.8 167 76.0
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.3e-64 250.4 214 64.0
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 8.2e-64 247.7 213 64.3
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 8.2e-64 247.7 220 63.2
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 8.2e-64 247.7 151 82.1
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.8e-63 246.5 209 66.5
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 4.1e-63 245.4 197 66.5
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 6.9e-63 244.6 220 63.2
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 9.0e-63 244.2 151 81.5
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.5e-62 243.4 168 74.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-61 240.4 208 66.8
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.7e-61 240.0 151 76.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 3.8e-61 238.8 197 64.0
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.8e-61 238.8 136 85.3
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.1e-60 237.3 151 78.1
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.2e-60 234.6 187 68.4
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 1.0e-58 230.7 195 60.5
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.0e-58 230.7 212 59.0
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.8e-58 229.9 145 76.6
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 2.3e-58 229.6 205 61.5
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 5.1e-58 228.4 225 59.6
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 5.1e-58 228.4 215 62.8
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 6.7e-58 228.0 212 59.9
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 2.5e-57 226.1 212 58.5
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 5.7e-57 224.9 139 78.4
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 5.7e-57 224.9 213 59.6
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 3.7e-56 222.2 196 61.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.1e-55 220.7 221 57.0
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.4e-55 220.3 197 58.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.4e-55 219.5 166 66.3
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.4e-55 219.5 166 66.3
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 3.1e-55 219.2 215 55.8
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.1e-55 219.2 151 75.5
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.5e-54 216.9 217 56.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.0e-54 216.5 219 59.8
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 2.0e-54 216.5 128 79.7
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.7e-53 213.4 197 64.0
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.2e-53 213.0 182 63.7
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 5.0e-53 211.8 160 65.6
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 5.0e-53 211.8 194 61.3
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.1e-52 210.7 214 56.1
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.1e-52 210.7 216 56.9
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 2.5e-52 209.5 208 58.7
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.1e-51 206.5 151 65.6
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 2.0e-49 199.9 176 60.2
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 7.4e-49 198.0 109 89.9
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 9.7e-49 197.6 176 56.2
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 3.8e-45 185.7 109 81.7
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.2e-44 182.2 152 59.2
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.7e-43 178.7 110 80.0
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.1e-39 167.5 171 55.6
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 9.4e-36 154.5 149 60.4
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.8e-34 150.2 159 50.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 8.8e-34 147.9 162 53.1
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.5e-33 144.8 152 56.6
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 8.2e-32 141.4 157 51.6
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.8e-31 140.2 72 94.4
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.8e-31 140.2 147 55.8
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 8.0e-27 124.8 155 40.6
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.3e-21 107.5 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.3e-21 107.5 68 75.0
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.5e-17 94.0 102 54.9
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 6.3e-16 88.6 58 70.7
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.1e-12 77.8 52 69.2


User provided reference genes

Program Settings