Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 2.1e-83 312.4 167 100.0
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.8e-21 106.7 183 41.0
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 3.9e-21 105.5 184 39.1
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.5e-20 103.6 174 42.0
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 1.3e-19 100.5 173 39.3
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 3.7e-19 99.0 190 37.9
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.4e-18 96.3 180 41.1
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 2.6e-17 92.8 187 38.0
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.6e-17 92.8 171 38.0
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 4.5e-17 92.0 177 35.6
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 5.9e-17 91.7 186 34.9
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 3.8e-16 89.0 176 38.6
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.5e-15 87.0 181 38.7
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 1.9e-15 86.7 181 35.4
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 3.2e-15 85.9 178 33.7
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 4.2e-15 85.5 177 36.2
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 5.5e-15 85.1 170 38.2
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 9.4e-15 84.3 186 36.6
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 1.2e-14 84.0 178 36.0
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 1.6e-14 83.6 176 35.2
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 2.1e-14 83.2 177 35.6
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 4.7e-14 82.0 177 35.6
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.4e-13 80.5 180 33.9
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 1.8e-13 80.1 173 36.4
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 1.8e-13 80.1 164 34.8
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 1.8e-13 80.1 191 34.6
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.3e-13 79.7 160 38.1
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 3.0e-13 79.3 161 36.0
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 4.0e-13 79.0 165 39.4
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 4.0e-13 79.0 158 36.7
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 4.0e-13 79.0 192 34.9
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 5.2e-13 78.6 177 32.8
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 5.2e-13 78.6 177 32.8
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 5.2e-13 78.6 177 32.8
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 8.8e-13 77.8 164 32.9
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 1.2e-12 77.4 188 34.0
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 1.5e-12 77.0 181 33.1
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.5e-12 77.0 160 35.6
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 2.0e-12 76.6 177 32.2
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.6e-12 76.3 194 32.5
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 2.6e-12 76.3 179 34.1
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 2.6e-12 76.3 177 32.8
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 3.3e-12 75.9 176 31.8
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 4.4e-12 75.5 173 33.5
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.4e-12 75.5 195 32.8
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 5.7e-12 75.1 179 31.8
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 7.5e-12 74.7 160 33.8
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 7.5e-12 74.7 179 34.6
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 9.7e-12 74.3 176 35.2
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 9.7e-12 74.3 182 34.1
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 9.7e-12 74.3 182 34.1
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 9.7e-12 74.3 181 34.8
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.3e-11 73.9 192 32.3
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 2.2e-11 73.2 170 34.1
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 8.2e-11 71.2 175 32.0
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 1.1e-10 70.9 173 34.1
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 2.4e-10 69.7 182 34.6
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 2.4e-10 69.7 182 34.6
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 3.1e-10 69.3 172 34.9
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 1.7e-08 63.5 168 33.3
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 1.1e-07 60.8 186 34.4
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 1.5e-07 60.5 174 31.0
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 3.2e-07 59.3 164 36.6
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 5.5e-07 58.5 162 32.7
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 5.5e-07 58.5 173 31.8
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 5.5e-07 58.5 119 37.8
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 1.2e-06 57.4 106 34.9
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 6.1e-06 55.1 150 34.7
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 6.1e-06 55.1 167 29.3
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 6.1e-06 55.1 184 29.9


User provided reference genes

Program Settings