Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 5.2e-177 624.8 446 100.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 7.1e-110 401.7 392 84.2
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.2e-109 401.0 386 80.6
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 4.8e-106 389.0 369 79.9
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.3e-103 380.9 371 80.3
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 3.8e-103 379.4 380 77.6
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 2.5e-102 376.7 387 70.5
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.5e-102 375.6 372 79.0
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 5.5e-102 375.6 387 72.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 6.0e-101 372.1 337 85.5
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 6.7e-100 368.6 333 84.7
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 8.7e-100 368.2 394 70.3
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.9e-99 367.1 331 84.6
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 4.3e-99 365.9 353 83.6
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 7.4e-99 365.2 366 80.9
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 9.6e-99 364.8 378 77.8
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.3e-98 364.4 372 78.8
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.1e-98 363.6 391 77.0
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 6.2e-98 362.1 368 73.6
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 1.1e-97 361.3 386 81.6
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.4e-97 360.1 244 86.9
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.4e-97 360.1 366 81.1
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 3.1e-97 359.8 391 77.2
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 3.1e-97 359.8 366 77.3
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 5.3e-97 359.0 392 73.5
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 6.9e-97 358.6 377 74.5
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.6e-96 356.7 376 79.0
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 2.6e-96 356.7 390 70.5
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 3.4e-96 356.3 370 75.9
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 5.8e-96 355.5 363 76.0
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 2.2e-95 353.6 365 74.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.2e-93 347.8 369 80.2
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.6e-93 347.4 372 80.1
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 6.1e-93 345.5 245 84.9
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 7.9e-93 345.1 360 77.5
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.0e-92 343.2 374 78.3
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.1e-92 342.4 246 77.2
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.1e-92 342.4 246 77.2
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.5e-91 340.9 348 64.4
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 2.5e-91 340.1 356 80.3
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 3.3e-91 339.7 374 70.1
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.3e-90 337.8 368 73.4
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.8e-90 336.7 363 62.0
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 4.8e-90 335.9 341 73.6
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 4.8e-90 335.9 368 68.2
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.1e-89 334.7 374 69.8
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.4e-89 333.6 373 75.6
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.2e-88 331.3 372 77.4
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.2e-88 331.3 370 68.1
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.2e-88 331.3 366 66.9
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.4e-88 329.7 207 88.4
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 7.7e-88 328.6 344 76.7
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.0e-87 328.2 389 67.9
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 8.5e-87 325.1 372 73.4
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 8.5e-87 325.1 347 67.1
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 9.4e-86 321.6 391 68.0
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 2.7e-85 320.1 369 71.5
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 1.4e-84 317.8 241 77.2
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 4.3e-83 312.8 370 67.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 5.7e-83 312.4 386 65.8
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.3e-82 311.2 369 72.4
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.8e-82 310.1 347 75.8
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.8e-82 309.3 343 77.6
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 2.4e-81 307.0 257 73.9
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 3.1e-81 306.6 376 69.4
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 5.3e-81 305.8 369 67.2
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 9.1e-81 305.1 370 66.2
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.5e-80 304.3 358 68.4
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.3e-79 301.2 360 69.7
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.7e-79 300.8 379 73.6
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 8.5e-79 298.5 381 59.8
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 8.5e-79 298.5 378 64.6
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.1e-78 298.1 251 70.9
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.4e-78 297.7 382 66.8
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 7.2e-78 295.4 251 70.9
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.1e-75 288.1 367 67.8
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 2.0e-75 287.3 356 66.6
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 3.7e-74 283.1 391 65.2
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 7.0e-73 278.9 258 61.6
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.2e-72 278.1 391 66.8
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 1.5e-72 277.7 161 83.9
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.5e-72 277.7 210 76.2
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 4.5e-72 276.2 209 75.1
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.2e-71 273.9 161 83.2
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 3.8e-71 273.1 390 52.6
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 6.1e-69 265.8 229 69.9
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.4e-68 264.6 248 64.5
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.9e-68 263.1 160 78.8
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.5e-67 261.2 147 85.7
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 8.5e-63 245.4 202 70.8
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.5e-62 244.6 160 73.8
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.9e-62 244.2 159 76.1
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 5.5e-62 242.7 201 70.1
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.6e-61 241.1 160 72.5
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.6e-61 241.1 160 72.5
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.6e-61 241.1 160 72.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.6e-61 241.1 160 72.5
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 8.0e-61 238.8 160 71.9
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 1.8e-57 227.6 259 58.3
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 7.0e-57 225.7 161 70.2
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 2.9e-55 220.3 250 58.0
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 4.2e-54 216.5 161 67.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 5.7e-51 206.1 327 66.7
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.7e-47 194.5 160 61.9
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.7e-47 194.5 160 61.9
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.1e-45 186.0 162 59.9
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.1e-45 186.0 162 59.9
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 4.1e-41 173.3 152 62.5
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 1.2e-32 145.2 163 49.7
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.6e-27 127.5 163 45.4
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.6e-24 118.2 161 42.2
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 8.6e-23 112.5 159 44.0
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 9.2e-17 92.4 139 39.6
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.2e-13 82.0 58 69.0
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 5.2e-12 76.6 95 47.4
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 9.9e-11 72.4 157 34.4
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 7.3e-06 56.2 100 39.0
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.3e-06 56.2 193 64.2


User provided reference genes

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