Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 1.6e-97 359.4 180 100.0
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 1.3e-94 349.7 179 97.8
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 1.1e-72 276.9 137 100.0
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 1.1e-69 266.9 141 95.7
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.7e-33 146.7 196 48.0
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 5.9e-31 138.3 218 43.1
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 6.5e-30 134.8 142 51.4
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 3.2e-29 132.5 212 42.5
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 7.2e-29 131.3 193 42.0
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.7e-28 128.6 182 41.8
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 6.1e-28 128.3 193 45.6
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 6.1e-28 128.3 138 50.0
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.8e-27 126.7 175 40.6
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 5.2e-27 125.2 138 49.3
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 8.8e-27 124.4 158 43.0
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 8.8e-27 124.4 98 61.2
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.6e-26 122.9 186 41.9
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 2.6e-26 122.9 146 49.3
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 5.7e-26 121.7 189 39.2
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 5.7e-26 121.7 141 46.8
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 7.5e-26 121.3 112 56.2
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 9.8e-26 120.9 119 49.6
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 1.3e-25 120.6 146 46.6
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.3e-25 120.6 161 42.2
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 2.2e-25 119.8 160 42.5
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 6.3e-25 118.2 171 40.4
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 8.3e-25 117.9 164 42.7
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 8.3e-25 117.9 139 46.8
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.1e-24 117.5 152 42.8
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.1e-24 117.5 221 39.8
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.4e-24 117.1 138 47.8
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.4e-24 117.1 216 36.1
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.4e-24 117.1 152 44.7
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 2.4e-24 116.3 165 43.0
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 2.4e-24 116.3 152 42.1
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 2.4e-24 116.3 196 42.3
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 2.4e-24 116.3 188 42.0
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 3.1e-24 115.9 100 59.0
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 4.1e-24 115.5 140 45.7
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.1e-24 115.5 151 41.7
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 7.0e-24 114.8 92 58.7
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 7.0e-24 114.8 222 39.6
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 9.2e-24 114.4 128 47.7
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 9.2e-24 114.4 138 47.8
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 1.2e-23 114.0 157 43.3
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.6e-23 113.6 187 40.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-23 113.6 112 51.8
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 2.0e-23 113.2 96 56.2
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 2.7e-23 112.8 131 49.6
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 2.7e-23 112.8 153 42.5
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 5.9e-23 111.7 153 41.8
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 7.8e-23 111.3 127 47.2
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 7.8e-23 111.3 100 55.0
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.0e-22 110.9 106 50.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 1.0e-22 110.9 209 38.8
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 1.0e-22 110.9 178 39.9
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.0e-22 110.9 106 51.9
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 1.3e-22 110.5 114 50.9
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 1.7e-22 110.2 123 49.6
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 2.3e-22 109.8 102 54.9
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 2.3e-22 109.8 143 42.7
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.3e-22 109.8 183 41.0
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 2.9e-22 109.4 107 52.3
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 5.0e-22 108.6 131 44.3
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.9e-21 106.7 88 60.2
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 2.5e-21 106.3 215 36.3
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 3.3e-21 105.9 107 50.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 3.3e-21 105.9 191 37.7
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 3.3e-21 105.9 191 37.7
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 3.3e-21 105.9 181 39.2
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.3e-21 105.9 156 41.7
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 3.3e-21 105.9 148 43.9
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 3.3e-21 105.9 103 51.5
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 4.3e-21 105.5 190 36.3
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 5.6e-21 105.1 91 53.8
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 7.3e-21 104.8 191 37.2
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 7.3e-21 104.8 185 37.8
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 9.5e-21 104.4 166 40.4
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 1.2e-20 104.0 191 37.2
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 2.1e-20 103.2 162 36.4
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.8e-20 102.8 137 44.5
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 6.1e-20 101.7 123 47.2
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.1e-20 101.7 123 47.2
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.8e-19 100.1 101 50.5
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 3.0e-19 99.4 135 44.4
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 2.0e-18 96.7 130 40.8
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.6e-18 96.3 186 34.9
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.6e-18 96.3 186 34.9
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 4.4e-18 95.5 164 37.2
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 4.4e-18 95.5 164 36.0
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 4.4e-18 95.5 142 37.3
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 9.8e-18 94.4 137 42.3
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.7e-17 93.6 153 37.3
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 6.4e-17 91.7 93 52.7
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.8e-16 90.1 165 39.4
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.6e-12 77.0 81 46.9
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.8e-12 76.3 90 46.7
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.4e-11 73.9 90 41.1
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 5.8e-10 68.6 65 47.7
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.2e-09 66.6 180 31.7
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 4.6e-07 58.9 92 32.6
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 7.8e-07 58.2 65 40.0


User provided reference genes

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