Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0411 Cannabis sativa HOM05D009769 ORTHO05D010823 1.3e-143 513.1 259 100.0
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 1.8e-129 466.1 253 93.3
CANSAT78G1808 Cannabis sativa HOM05D009769 ORTHO05D010823 5.6e-115 417.9 248 87.5
CANSAT21G1911 Cannabis sativa HOM05D009769 ORTHO05D010823 9.7e-59 231.1 141 88.7
CANSAT25G1274 Cannabis sativa HOM05D009769 ORTHO05D010823 1.7e-55 220.3 104 99.0
CANSAT80G2744 Cannabis sativa HOM05D009769 ORTHO05D010823 6.5e-55 218.4 109 98.2
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 7.9e-45 184.9 260 38.8
CANSAT25G3518 Cannabis sativa HOM05D009769 ORTHO05D010823 1.7e-42 177.2 250 38.8
CANSAT54G1089 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-35 154.5 141 60.3
CANSAT54G2169 Cannabis sativa HOM05D009769 ORTHO05D010823 8.5e-31 138.3 208 47.1
CANSAT35G0161 Cannabis sativa HOM05D009769 ORTHO05D010823 9.7e-27 124.8 85 81.2
CANSAT54G1636 Cannabis sativa HOM05D009769 ORTHO05D010823 8.3e-26 121.7 85 78.8
CANSAT25G0179 Cannabis sativa HOM05D009769 ORTHO05D010823 2.5e-22 110.2 126 41.3
CANSAT78G1568 Cannabis sativa HOM05D009769 ORTHO05D010823 3.7e-18 96.3 115 41.7
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 2.4e-17 93.6 264 28.4
Ciclev10031514m.g Citrus clementina HOM05D002639 ORTHO05D010823 1.6e-16 90.9 262 29.0
CANSAT80G2742 Cannabis sativa HOM05D009769 ORTHO05D010823 7.7e-16 88.6 105 40.0
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.1e-14 84.7 209 31.6
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 7.2e-14 82.0 193 29.5
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 1.2e-13 81.3 193 29.5
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 2.8e-13 80.1 193 29.0
Potri.017G019466 Populus trichocarpa HOM05D000030 ORTHO05D000009 2.8e-13 80.1 209 30.1
CANSAT25G1316 Cannabis sativa HOM05D014696 ORTHO05D010823 6.1e-13 79.0 166 33.7
CANSAT56G2685 Cannabis sativa HOM05D009769 ORTHO05D010823 8.0e-13 78.6 93 52.7
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 1.0e-12 78.2 144 34.0
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 2.3e-12 77.0 226 27.9
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 3.0e-12 76.6 225 28.9
CANSAT35G0260 Cannabis sativa HOM05D019351 ORTHO05D018844 6.8e-12 75.5 215 27.0
Dinv01242 Davidia involucrata HOM05D010363 ORTHO05D008693 6.8e-12 75.5 218 26.1
Rhsim01G0207900 Rhododendron simsii HOM05D012118 ORTHO05D009908 1.7e-10 70.9 214 26.2
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 2.2e-10 70.5 143 35.7
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 2.2e-10 70.5 143 35.7
QL08p032772 Quercus lobata HOM05D022192 ORTHO05D009908 8.3e-10 68.6 227 25.1
CANSAT54G0051 Cannabis sativa HOM05D009769 ORTHO05D010823 3.2e-09 66.6 136 33.8
CSS0025382 Camellia sinensis var. sinensis HOM05D012118 ORTHO05D009908 7.0e-09 65.5 178 27.0
GSVIVG01018225001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.0e-07 61.6 147 27.9
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 1.3e-07 61.2 187 26.2
GSVIVG01030359001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.7e-07 60.8 146 26.7
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 2.3e-07 60.5 150 30.7
GSVIVG01000313001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.9e-07 59.7 147 26.5
GSVIVG01023574001 Vitis vinifera HOM05D008451 ORTHO05D009908 3.9e-07 59.7 146 26.7
GSVIVG01000319001 Vitis vinifera HOM05D008451 ORTHO05D009908 8.6e-07 58.5 147 27.2
GSVIVG01003489001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.1e-06 58.2 146 26.0
GSVIVG01025899001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.1e-06 58.2 147 27.2
FAN23G0071 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.5e-06 57.8 181 27.1
GSVIVG01037305001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.5e-06 57.8 147 26.5
GSVIVG01012273001 Vitis vinifera HOM05D008451 ORTHO05D009908 1.9e-06 57.4 147 27.2
CAN.G129.28 Capsicum annuum HOM05D002639 ORTHO05D003094 3.3e-06 56.6 176 26.7
Thecc.04G055800 Theobroma cacao HOM05D008451 ORTHO05D009908 3.3e-06 56.6 108 30.6
BolC1t05578H Brassica oleracea HOM05D002639 ORTHO05D003094 4.3e-06 56.2 176 26.1
BraA01t04407Z Brassica rapa HOM05D002639 ORTHO05D003094 4.3e-06 56.2 176 26.1
Nitab4.5_0008499g0020 Nicotiana tabacum HOM05D002639 ORTHO05D003094 4.3e-06 56.2 176 27.3
BNapus_Darmor_BZH_scaffold_117p00160 Brassica napus HOM05D002639 ORTHO05D003094 5.6e-06 55.8 176 25.6
CANSAT01G1470 Cannabis sativa HOM05D019351 ORTHO05D018844 5.6e-06 55.8 153 28.1
ECA246G1134 Erigeron canadensis HOM05D002639 ORTHO05D003094 5.6e-06 55.8 178 27.5
GSVIVG01021857001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.6e-06 55.8 146 25.3
GSVIVG01022672001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.6e-06 55.8 146 26.7
GSVIVG01032145001 Vitis vinifera HOM05D008451 ORTHO05D009908 5.6e-06 55.8 147 27.2
CANSAT56G2158 Cannabis sativa HOM05D009769 ORTHO05D010823 7.3e-06 55.5 267 24.3
Lalb_Chr18g0051661 Lupinus albus HOM05D002639 ORTHO05D003094 7.3e-06 55.5 154 29.2
Nitab4.5_0000960g0070 Nicotiana tabacum HOM05D002639 ORTHO05D003094 7.3e-06 55.5 176 27.3


User provided reference genes

Program Settings