Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0361 Cannabis sativa HOM05D007313 ORTHO05D005299 2.8e-42 174.9 89 100.0
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 3.7e-10 68.2 80 48.8
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.4e-09 66.2 57 61.4
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.8e-09 65.9 64 56.2
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.8e-09 65.9 64 56.2
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.8e-09 65.9 64 56.2
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 5.4e-09 64.3 57 64.9
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 9.2e-09 63.5 60 65.0
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 9.2e-09 63.5 60 65.0
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 9.2e-09 63.5 60 65.0
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 1.2e-08 63.2 60 63.3
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 1.6e-08 62.8 54 66.7
ClCG01G006530 Citrullus lanatus HOM05D007313 ORTHO05D005299 1.6e-08 62.8 90 52.2
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 2.0e-08 62.4 59 64.4
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 2.0e-08 62.4 70 54.3
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 2.7e-08 62.0 59 64.4
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 3.5e-08 61.6 60 63.3
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 3.5e-08 61.6 61 57.4
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 3.5e-08 61.6 87 49.4
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 3.5e-08 61.6 61 55.7
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 4.5e-08 61.2 55 63.6
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 4.5e-08 61.2 57 57.9
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 4.5e-08 61.2 57 57.9
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 4.5e-08 61.2 57 57.9
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 5.9e-08 60.8 59 62.7
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 7.8e-08 60.5 56 64.3
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 7.8e-08 60.5 57 57.9
CiPaw.06G051300 Carya illinoinensis HOM05D007313 ORTHO05D005299 1.0e-07 60.1 76 46.1
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 1.3e-07 59.7 60 60.0
A08p26710 Brassica napus HOM05D007313 ORTHO05D005299 1.3e-07 59.7 52 67.3
BraA08t34617Z Brassica rapa HOM05D007313 ORTHO05D005299 1.3e-07 59.7 52 67.3
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 1.7e-07 59.3 56 62.5
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 1.7e-07 59.3 56 62.5
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 1.7e-07 59.3 56 62.5
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 1.7e-07 59.3 56 62.5
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 1.7e-07 59.3 56 62.5
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 1.7e-07 59.3 55 60.0
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 1.7e-07 59.3 71 56.3
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 2.3e-07 58.9 78 56.4
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 2.3e-07 58.9 78 56.4
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 2.9e-07 58.5 60 58.3
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 2.9e-07 58.5 60 60.0
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 2.9e-07 58.5 60 58.3
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 2.9e-07 58.5 60 58.3
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 2.9e-07 58.5 60 60.0
MELO3C005274.2 Cucumis melo HOM05D007313 ORTHO05D005299 2.9e-07 58.5 70 54.3
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 3.9e-07 58.2 78 56.4
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 5.0e-07 57.8 62 56.5
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 6.6e-07 57.4 60 55.0
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 6.6e-07 57.4 56 53.6
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 8.6e-07 57.0 78 46.2
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 8.6e-07 57.0 71 53.5
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 8.6e-07 57.0 67 52.2
AL1G40310 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 2.5e-06 55.5 77 53.2
Sed0026425 Sechium edule HOM05D007313 ORTHO05D005299 2.5e-06 55.5 63 55.6
Solyc04g007990.1 Solanum lycopersicum HOM05D007313 ORTHO05D005299 9.5e-06 53.5 76 42.1


User provided reference genes

Program Settings