Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 2.2e-109 399.1 216 100.0
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 7.8e-54 214.5 208 60.6
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 7.8e-54 214.5 208 60.6
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 5.1e-53 211.8 206 59.2
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 8.6e-53 211.1 213 60.1
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.1e-52 210.7 210 60.5
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 7.3e-52 208.0 213 61.5
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 1.6e-51 206.8 207 59.4
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 8.1e-51 204.5 226 57.1
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 2.3e-50 203.0 209 60.3
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 5.2e-50 201.8 230 55.7
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 8.9e-50 201.1 217 58.1
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 1.2e-49 200.7 206 55.3
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 1.5e-49 200.3 214 57.5
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 5.8e-49 198.4 208 56.2
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 9.9e-49 197.6 213 58.2
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.3e-48 197.2 206 56.8
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 2.2e-48 196.4 228 55.7
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 2.2e-48 196.4 209 57.4
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 2.2e-48 196.4 215 57.7
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.9e-48 196.1 234 55.1
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 4.9e-48 195.3 215 59.1
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 6.4e-48 194.9 215 55.8
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 3.2e-47 192.6 205 58.0
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 7.1e-47 191.4 205 57.6
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 7.1e-47 191.4 212 57.1
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 1.2e-46 190.7 212 55.2
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 1.2e-46 190.7 222 53.6
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 1.6e-46 190.3 210 56.7
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 1.6e-46 190.3 217 55.3
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.5e-46 189.1 207 57.5
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 6.0e-46 188.3 207 54.6
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 6.0e-46 188.3 214 56.5
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 1.0e-45 187.6 207 56.0
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 1.3e-45 187.2 214 57.9
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.7e-45 186.8 217 54.4
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 1.7e-45 186.8 206 58.3
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 2.3e-45 186.4 214 55.1
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 5.1e-45 185.3 198 57.6
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 6.6e-45 184.9 206 57.3
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 6.6e-45 184.9 207 57.0
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 8.6e-45 184.5 207 57.0
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 3.3e-44 182.6 215 51.2
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 7.3e-44 181.4 226 55.8
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 9.6e-44 181.0 210 56.2
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 4.7e-43 178.7 142 71.1
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 4.7e-43 178.7 219 50.7
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 8.1e-43 177.9 215 51.2
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 1.4e-42 177.2 207 52.2
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 1.8e-42 176.8 208 50.0
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.4e-42 176.4 213 51.2
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 2.4e-42 176.4 213 52.6
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 3.1e-42 176.0 182 58.2
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 5.2e-42 175.3 215 52.6
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.2e-41 174.1 209 51.2
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 1.5e-41 173.7 216 53.2
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 2.0e-41 173.3 206 52.4
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 9.9e-41 171.0 223 50.2
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.7e-40 170.2 197 56.9
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 1.7e-40 170.2 153 62.7
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 2.2e-40 169.9 211 53.6
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 2.9e-40 169.5 203 52.7
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 3.8e-40 169.1 211 48.8
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 3.8e-40 169.1 213 50.2
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 2.7e-38 162.9 199 51.8
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 2.3e-37 159.8 209 49.3
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.3e-37 159.8 218 50.0
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 3.9e-37 159.1 206 51.5
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 6.6e-37 158.3 216 48.6
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 1.1e-36 157.5 302 41.7
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 2.5e-36 156.4 245 45.7
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 5.6e-36 155.2 186 51.1
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 9.6e-36 154.5 206 50.5
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 2.1e-35 153.3 204 48.0
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 2.8e-35 152.9 200 47.5
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 2.6e-33 146.4 208 45.7
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 4.5e-33 145.6 211 47.4
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 6.4e-32 141.7 207 44.4
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 3.2e-31 139.4 198 44.4
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.2e-30 137.5 118 63.6
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 4.6e-30 135.6 213 46.0
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 6.0e-30 135.2 204 44.6
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 2.3e-29 133.3 211 42.2
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 2.5e-28 129.8 213 41.3
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 4.8e-27 125.6 200 45.5
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 1.4e-26 124.0 196 42.9
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.5e-25 120.6 98 69.4
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 2.0e-25 120.2 202 40.1
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 3.4e-25 119.4 207 41.1
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 7.6e-25 118.2 196 42.9
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 1.7e-24 117.1 163 43.6
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 3.2e-23 112.8 161 43.5
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 3.2e-23 112.8 161 43.5
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 1.3e-21 107.5 148 47.3
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.8e-18 97.1 143 48.3
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.7e-16 90.5 189 39.2
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 4.9e-16 89.0 192 40.1
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 1.2e-14 84.3 129 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 1.3e-13 80.9 210 32.9
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 3.9e-13 79.3 217 34.6
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.5e-12 76.6 120 45.8
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 3.7e-11 72.8 233 33.9
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 5.9e-09 65.5 170 31.8
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 1.3e-08 64.3 171 32.2


User provided reference genes

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