Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0047 Cannabis sativa HOM05D008422 ORTHO05D000352 7.4e-161 570.5 287 100.0
CANSAT35G1128 Cannabis sativa HOM05D008422 ORTHO05D000352 9.5e-124 447.2 304 79.3
CANSAT25G1071 Cannabis sativa HOM05D008422 ORTHO05D000352 6.0e-118 427.9 304 74.7
CANSAT11G0413 Cannabis sativa HOM05D008422 ORTHO05D000352 1.3e-112 410.2 322 69.6
CANSAT78G0676 Cannabis sativa HOM05D008422 ORTHO05D000352 3.1e-106 389.0 304 68.1
CANSAT25G0334 Cannabis sativa HOM05D008422 ORTHO05D000352 3.4e-105 385.6 304 70.7
CANSAT80G1547 Cannabis sativa HOM05D008422 ORTHO05D000352 2.8e-99 365.9 291 70.1
CANSAT78G2509 Cannabis sativa HOM05D008422 ORTHO05D000352 4.4e-97 358.6 291 67.7
CANSAT01G3212 Cannabis sativa HOM05D008422 ORTHO05D000352 2.4e-95 352.8 252 76.6
CANSAT25G2247 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-94 349.7 265 70.9
CANSAT80G0281 Cannabis sativa HOM05D008422 ORTHO05D000352 2.7e-94 349.4 271 72.3
CANSAT54G1906 Cannabis sativa HOM05D008422 ORTHO05D000352 4.9e-88 328.6 270 67.0
CANSAT80G1044 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-86 323.2 270 67.0
CANSAT21G1212 Cannabis sativa HOM05D008422 ORTHO05D000352 7.9e-86 321.2 274 65.7
CANSAT35G0006 Cannabis sativa HOM05D008422 ORTHO05D000352 7.9e-86 321.2 304 61.2
CANSAT21G2111 Cannabis sativa HOM05D008422 ORTHO05D000352 1.6e-83 313.5 270 65.9
CANSAT25G0953 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-83 313.2 288 63.5
CANSAT54G2906 Cannabis sativa HOM05D008422 ORTHO05D000352 3.4e-81 305.8 261 65.9
CANSAT11G0201 Cannabis sativa HOM05D008422 ORTHO05D000352 8.4e-80 301.2 259 65.6
CANSAT25G0712 Cannabis sativa HOM05D008422 ORTHO05D000352 5.6e-76 288.5 252 65.1
CANSAT64G2326 Cannabis sativa HOM05D008422 ORTHO05D000352 9.3e-71 271.2 248 64.5
CANSAT35G0045 Cannabis sativa HOM05D008422 ORTHO05D000352 6.1e-62 241.9 247 58.3
CANSAT54G1126 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-61 240.7 180 75.6
CANSAT01G2793 Cannabis sativa HOM05D008422 ORTHO05D000352 2.0e-57 226.9 201 64.2
CANSAT01G2226 Cannabis sativa HOM05D008422 ORTHO05D000352 2.2e-56 223.4 252 55.2
CANSAT11G0378 Cannabis sativa HOM05D008422 ORTHO05D000352 5.5e-55 218.8 225 56.0
CANSAT80G1023 Cannabis sativa HOM05D008422 ORTHO05D000352 1.7e-51 207.2 160 70.0
CANSAT54G1278 Cannabis sativa HOM05D008422 ORTHO05D000352 5.9e-49 198.7 304 44.7
CANSAT35G1743 Cannabis sativa HOM05D008422 ORTHO05D000352 2.2e-48 196.8 141 73.8
CANSAT21G0753 Cannabis sativa HOM05D008422 ORTHO05D000352 1.5e-44 184.1 174 61.5
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 5.3e-42 175.6 324 34.6
CANSAT24G0001 Cannabis sativa HOM05D008422 ORTHO05D000352 3.2e-39 166.4 178 59.0
CANSAT25G2893 Cannabis sativa HOM05D008422 ORTHO05D000352 1.9e-23 114.0 171 48.5
CANSAT21G0075 Cannabis sativa HOM05D008422 ORTHO05D000352 6.3e-19 99.0 60 78.3
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.6e-14 84.3 197 28.9
CANSAT01G0535 Cannabis sativa HOM05D008422 ORTHO05D000352 2.8e-14 83.6 284 27.8
CANSAT80G1559 Cannabis sativa HOM05D008422 ORTHO05D000352 3.6e-14 83.2 278 28.4
CANSAT25G2094 Cannabis sativa HOM05D040811 ORTHO05D000880 1.4e-13 81.3 135 33.3
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 3.1e-13 80.1 324 24.4
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.5e-12 77.8 197 28.4
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 5.8e-12 75.9 161 29.8
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 9.8e-12 75.1 300 29.0
CANSAT35G0387 Cannabis sativa HOM05D009938 ORTHO05D000880 9.8e-12 75.1 276 23.6
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 4.9e-11 72.8 135 31.9
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-10 71.6 302 27.5
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 1.4e-10 71.2 226 27.9
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 1.9e-10 70.9 137 29.9
COL.COLO4_24943 Corchorus olitorius HOM05D000429 ORTHO05D000880 1.9e-10 70.9 273 26.7
CANSAT80G2143 Cannabis sativa HOM05D009938 ORTHO05D000880 2.4e-10 70.5 125 29.6
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 4.1e-10 69.7 282 27.7
CSS0001713 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.1e-10 69.7 145 26.9
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 5.4e-10 69.3 293 25.3
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 5.4e-10 69.3 201 27.9
Oeu064652.1 Olea europaea HOM05D000429 ORTHO05D000352 5.4e-10 69.3 301 25.2
CANSAT11G2410 Cannabis sativa HOM05D009938 ORTHO05D000880 7.0e-10 68.9 143 28.7
CANSAT01G1774 Cannabis sativa HOM05D008422 ORTHO05D000352 9.2e-10 68.6 239 26.8
CANSAT56G1739 Cannabis sativa HOM05D009938 ORTHO05D000880 1.2e-09 68.2 125 28.8
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-09 67.8 265 27.2
ECA232G3051 Erigeron canadensis HOM05D001690 ORTHO05D002627 2.0e-09 67.4 154 27.3
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 2.0e-09 67.4 309 24.6
CANSAT11G1642 Cannabis sativa HOM05D040811 ORTHO05D000352 4.6e-09 66.2 171 27.5
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.6e-09 66.2 291 24.7
Oeu058894.1 Olea europaea HOM05D000047 ORTHO05D008058 6.0e-09 65.9 298 25.2
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 7.8e-09 65.5 291 24.1
ECA232G0020 Erigeron canadensis HOM05D001690 ORTHO05D002578 7.8e-09 65.5 171 30.4
Oeu060525.1 Olea europaea HOM05D000047 ORTHO05D008058 1.0e-08 65.1 310 24.2
CANSAT54G1569 Cannabis sativa HOM05D000127 ORTHO05D007184 1.7e-08 64.3 61 54.1
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 1.7e-08 64.3 283 23.3
CANSAT01G0191 Cannabis sativa HOM05D009938 ORTHO05D000880 2.3e-08 63.9 144 25.7
Oeu022520.1 Olea europaea HOM05D005901 ORTHO05D000880 2.3e-08 63.9 327 23.9
Oeu033810.1 Olea europaea HOM05D000429 ORTHO05D000352 2.3e-08 63.9 308 24.0
CANSAT25G0316 Cannabis sativa HOM05D009938 ORTHO05D000352 3.0e-08 63.5 280 25.7
ECA236G4115 Erigeron canadensis HOM05D000047 ORTHO05D002578 3.9e-08 63.2 214 25.2
Oeu054349.1 Olea europaea HOM05D000047 ORTHO05D000044 5.0e-08 62.8 297 24.2
CSS0016793 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.6e-08 62.4 124 26.6
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 6.6e-08 62.4 313 23.3
MBI16_g26216_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.6e-08 62.4 137 29.2
ECA240G4802 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.1e-07 61.6 145 28.3
Oeu044645.1 Olea europaea HOM05D000429 ORTHO05D000352 1.5e-07 61.2 303 25.7
TWI75G1625 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.5e-07 61.2 255 24.7
CSS0010751 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 1.9e-07 60.8 142 24.6
Oeu023226.1 Olea europaea HOM05D000047 ORTHO05D008058 1.9e-07 60.8 309 23.6
PSO063G5521 Papaver somniferum HOM05D000429 ORTHO05D000352 1.9e-07 60.8 223 30.0
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 1.9e-07 60.8 95 34.7
CSS0004875 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.5e-07 60.5 138 24.6
CANSAT11G1756 Cannabis sativa HOM05D009938 ORTHO05D000880 2.5e-07 60.5 183 25.7
Oeu034788.1 Olea europaea HOM05D000047 ORTHO05D000044 2.5e-07 60.5 307 24.4
CSS0007125 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.3e-07 60.1 138 23.9
CSS0007462 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 4.3e-07 59.7 124 25.8
CANSAT01G1775 Cannabis sativa HOM05D000429 ORTHO05D000880 4.3e-07 59.7 124 28.2
CANSAT64G2626 Cannabis sativa HOM05D008422 ORTHO05D000352 4.3e-07 59.7 129 28.7
CANSAT78G0541 Cannabis sativa HOM05D019409 ORTHO05D000352 4.3e-07 59.7 226 28.3
Oeu014576.1 Olea europaea HOM05D005901 ORTHO05D000880 4.3e-07 59.7 324 21.9
Oeu017674.2 Olea europaea HOM05D000047 ORTHO05D000044 4.3e-07 59.7 173 26.6
CSS0018970 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 5.6e-07 59.3 144 27.1
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 7.3e-07 58.9 168 25.6
CANSAT11G0771 Cannabis sativa HOM05D012483 ORTHO05D000352 9.5e-07 58.5 106 30.2
Lj6P789T46 Lonicera japonica HOM05D001436 ORTHO05D000880 9.5e-07 58.5 150 26.7
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.2e-06 58.2 168 25.0
CANSAT64G0046 Cannabis sativa HOM05D008422 ORTHO05D000352 1.2e-06 58.2 216 25.9
Oeu002927.1 Olea europaea HOM05D000047 ORTHO05D000044 1.2e-06 58.2 158 26.6
Oeu060819.1 Olea europaea HOM05D000429 ORTHO05D008058 1.2e-06 58.2 275 24.0
PSO170G6520 Papaver somniferum HOM05D000429 ORTHO05D002449 1.2e-06 58.2 223 30.0
PSO017G1308 Papaver somniferum HOM05D000429 ORTHO05D002449 1.6e-06 57.8 204 27.0
PSO765G0150 Papaver somniferum HOM05D000429 ORTHO05D002449 1.6e-06 57.8 223 26.5
vmacro05736 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.6e-06 57.8 129 21.7
ECA233G0268 Erigeron canadensis HOM05D000047 ORTHO05D002578 2.1e-06 57.4 82 31.7
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.8e-06 57.0 168 24.4
TWI14G0816 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.8e-06 57.0 219 25.1
vmacro03782 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-06 57.0 129 21.7
vmacro04112 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-06 57.0 129 21.7
vmacro04113 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-06 57.0 129 21.7
vmacro04163 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-06 57.0 129 21.7
vmacro12530 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-06 57.0 129 21.7
vmacro22298 Vaccinium macrocarpon HOM05D002837 ORTHO05D000352 2.8e-06 57.0 129 21.7
PSO478G0094 Papaver somniferum HOM05D000429 ORTHO05D002449 3.6e-06 56.6 212 25.5
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 4.7e-06 56.2 308 25.3
CSS0004947 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D002449 6.2e-06 55.8 142 23.9
TWI77G0163 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.2e-06 55.8 138 24.6
ECA236G1318 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-06 55.5 95 29.5


User provided reference genes

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