Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 2.2e-84 315.8 191 100.0
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 4.4e-77 291.6 191 91.6
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 1.4e-75 286.6 191 90.6
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 1.4e-75 286.6 191 90.6
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 5.3e-70 268.1 191 89.0
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 1.7e-68 263.1 191 85.9
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.9e-68 262.3 191 85.9
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 2.1e-58 229.6 192 76.6
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 1.4e-54 216.9 175 76.6
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 2.4e-54 216.1 192 73.4
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 1.2e-53 213.8 187 75.4
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 7.6e-53 211.1 184 72.8
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 7.6e-53 211.1 190 71.6
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 1.0e-52 210.7 183 73.2
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 1.7e-52 209.9 192 71.4
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.2e-52 209.5 165 79.4
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 2.2e-52 209.5 190 72.6
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 2.9e-52 209.1 195 71.3
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 4.9e-52 208.4 190 73.2
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 1.1e-51 207.2 157 82.8
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 1.4e-51 206.8 192 72.9
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 1.9e-51 206.5 163 79.8
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 1.9e-51 206.5 193 74.1
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 2.5e-51 206.1 193 71.0
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 3.2e-51 205.7 157 82.2
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 9.3e-51 204.1 191 70.7
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 9.3e-51 204.1 196 68.9
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 9.3e-51 204.1 191 70.7
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 1.6e-50 203.4 247 57.5
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.1e-50 203.0 174 74.7
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 3.5e-50 202.2 190 70.0
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 3.5e-50 202.2 190 70.0
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 7.9e-50 201.1 175 77.1
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 7.9e-50 201.1 196 68.9
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 1.0e-49 200.7 191 68.6
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 1.3e-49 200.3 194 68.6
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.3e-49 200.3 192 68.8
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.8e-49 199.9 193 69.9
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 2.3e-49 199.5 175 74.9
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 2.3e-49 199.5 176 72.7
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.9e-49 198.7 192 68.2
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 3.9e-49 198.7 192 69.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 5.1e-49 198.4 174 77.0
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 8.7e-49 197.6 174 75.3
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 1.1e-48 197.2 174 74.7
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 1.1e-48 197.2 147 85.0
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.5e-48 196.8 174 75.9
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.5e-48 196.8 174 75.9
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.5e-48 196.8 174 75.9
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.5e-48 196.8 191 68.1
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.9e-48 196.4 193 69.9
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 1.9e-48 196.4 170 74.7
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 4.3e-48 195.3 154 79.2
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 5.7e-48 194.9 174 74.7
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 5.7e-48 194.9 175 75.4
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 7.4e-48 194.5 175 75.4
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 7.4e-48 194.5 175 75.4
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 7.4e-48 194.5 193 70.5
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 9.6e-48 194.1 177 74.0
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 9.6e-48 194.1 164 75.0
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 1.3e-47 193.7 190 67.9
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 1.6e-47 193.4 175 75.4
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 2.1e-47 193.0 149 82.6
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 2.1e-47 193.0 192 67.2
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 2.1e-47 193.0 183 69.9
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 2.8e-47 192.6 189 68.3
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 3.7e-47 192.2 151 81.5
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 3.7e-47 192.2 165 73.9
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 3.7e-47 192.2 191 68.6
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 3.7e-47 192.2 164 75.6
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 4.8e-47 191.8 177 72.3
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 6.3e-47 191.4 177 69.5
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 6.3e-47 191.4 192 67.7
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 6.3e-47 191.4 183 69.4
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 1.1e-46 190.7 171 75.4
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-46 190.7 177 72.3
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.4e-46 190.3 165 72.1
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.8e-46 189.9 170 75.3
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 4.1e-46 188.7 164 72.0
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 5.3e-46 188.3 192 67.7
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 5.3e-46 188.3 174 73.0
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 5.3e-46 188.3 173 67.6
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 5.3e-46 188.3 149 81.2
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 6.9e-46 188.0 148 81.8
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 9.0e-46 187.6 154 77.9
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 1.5e-45 186.8 191 66.0
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 2.0e-45 186.4 168 73.2
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 2.6e-45 186.0 190 65.3
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.6e-45 186.0 191 67.0
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.4e-45 185.7 150 79.3
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 4.5e-45 185.3 191 64.9
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 7.6e-45 184.5 174 70.1
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 7.6e-45 184.5 191 63.4
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 1.0e-44 184.1 196 65.8
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 2.5e-43 179.5 192 60.9
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 2.1e-42 176.4 164 71.3
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 4.6e-42 175.3 183 65.0
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 4.6e-42 175.3 183 65.0
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 6.1e-42 174.9 158 72.8
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 1.8e-41 173.3 158 70.9
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 1.6e-39 166.8 174 66.7
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.6e-39 166.8 182 63.2
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 6.3e-39 164.9 134 82.1
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.2e-37 160.6 176 64.8
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 4.5e-37 158.7 173 61.3
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 1.9e-35 153.3 191 59.2
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.8e-31 139.4 177 59.9
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.2e-29 134.0 161 59.0
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 2.2e-28 129.8 157 59.9
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.4e-25 120.6 102 63.7
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 2.0e-24 116.7 155 58.7
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 3.3e-24 115.9 150 58.7
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.1e-22 110.9 155 56.8
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 1.8e-22 110.2 124 56.5
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 8.5e-20 101.3 112 67.0
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.1e-19 100.9 140 58.6
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.5e-19 100.5 110 61.8
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 5.5e-19 98.6 163 49.7
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 2.1e-18 96.7 71 67.6
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 7.7e-13 78.2 121 47.9
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.2e-08 64.3 161 41.6


User provided reference genes

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