Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.3e-188 662.9 327 100.0
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.5e-176 622.1 328 93.0
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 1.3e-172 609.8 328 92.1
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 1.5e-170 602.8 328 91.5
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 3.8e-169 598.2 333 88.9
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.9e-161 572.0 317 89.3
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 5.9e-130 468.0 327 71.9
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-129 466.8 330 73.6
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.6e-129 464.2 330 73.3
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 4.2e-128 461.8 329 72.3
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.7e-127 458.4 330 73.3
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-126 456.8 330 73.3
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.2e-125 453.8 332 72.3
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.8e-123 446.4 337 68.8
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.4e-123 446.0 332 68.1
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 7.0e-123 444.5 328 68.6
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 1.2e-122 443.7 337 68.8
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 5.9e-122 441.4 329 69.3
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.7e-121 439.9 328 68.6
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.3e-121 439.5 331 67.4
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 3.9e-121 438.7 336 66.4
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 3.9e-121 438.7 331 67.4
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.1e-120 437.2 327 68.2
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 3.3e-120 435.6 330 69.7
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 4.3e-120 435.3 333 69.4
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 7.3e-120 434.5 347 65.7
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.6e-119 433.3 325 69.2
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 2.1e-119 433.0 333 69.4
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.1e-119 433.0 332 68.7
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 2.8e-119 432.6 333 69.1
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.2e-117 427.2 332 66.6
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 4.4e-117 425.2 332 65.4
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 9.8e-117 424.1 333 68.2
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.9e-116 422.5 334 66.2
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 6.4e-116 421.4 342 64.3
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 1.1e-115 420.6 339 65.8
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 3.2e-115 419.1 327 65.4
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 7.0e-115 417.9 310 70.6
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.7e-114 416.0 328 68.9
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 4.6e-114 415.2 334 62.9
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.1e-112 410.6 317 65.6
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 1.9e-112 409.8 331 63.7
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.6e-112 408.3 329 67.8
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.8e-111 406.0 310 68.1
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 3.1e-110 402.5 332 64.2
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 6.8e-110 401.4 339 61.9
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 8.9e-110 401.0 295 69.8
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 2.6e-109 399.4 331 63.4
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 4.4e-109 398.7 331 65.0
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.2e-108 396.4 333 63.1
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 3.7e-108 395.6 335 62.1
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 2.4e-107 392.9 332 63.3
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 2.7e-106 389.4 331 62.2
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.7e-106 389.4 332 61.4
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.3e-105 387.1 328 61.0
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 2.3e-105 386.3 372 57.5
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.0e-105 386.0 318 64.2
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.9e-104 383.3 329 63.8
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 5.6e-104 381.7 344 60.5
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 8.1e-103 377.9 303 66.0
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 8.1e-103 377.9 339 60.2
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.1e-102 377.5 315 62.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.1e-102 377.5 308 63.6
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.4e-102 377.1 326 60.4
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.8e-102 376.7 330 60.9
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 3.1e-102 375.9 303 64.7
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 5.8e-101 371.7 315 61.3
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-99 367.5 326 63.8
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.7e-98 362.8 281 66.2
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.9e-96 356.7 371 54.2
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 4.4e-93 345.5 298 61.1
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 7.6e-93 344.7 280 62.9
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 3.8e-92 342.4 318 57.5
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 4.9e-92 342.0 335 55.8
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 5.1e-89 332.0 283 63.3
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 2.6e-85 319.7 213 77.0
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-84 316.2 281 63.0
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 6.4e-84 315.1 226 70.4
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 8.4e-84 314.7 333 52.6
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.2e-82 310.8 305 54.8
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 8.7e-81 304.7 213 71.4
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 1.1e-80 304.3 327 51.1
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 8.1e-79 298.1 334 53.6
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-78 296.2 330 56.1
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 4.0e-78 295.8 329 54.1
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-77 294.3 329 54.4
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-77 293.9 314 55.1
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.6e-77 293.1 191 77.0
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 1.2e-74 284.3 217 68.2
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.1e-73 278.9 231 66.2
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-71 274.2 279 59.1
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.6e-66 255.8 176 75.0
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 5.7e-64 248.8 282 51.4
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.6e-61 240.0 179 67.6
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 3.4e-61 239.6 367 41.4
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.0e-57 228.0 170 68.8
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 4.8e-55 219.2 126 84.1
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 6.5e-52 208.8 169 65.7
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.9e-51 207.2 173 59.5
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 4.2e-51 206.1 268 42.2
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 2.3e-49 200.3 295 40.0
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 5.9e-37 159.1 298 37.6
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.6e-34 149.8 156 53.2
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 4.7e-26 122.9 241 35.7
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 1.9e-19 100.9 98 54.1
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 6.8e-17 92.4 69 59.4
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 9.8e-16 88.6 109 47.7
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 7.0e-14 82.4 325 25.5
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.6e-13 81.3 91 49.5
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 7.5e-08 62.4 40 70.0


User provided reference genes

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