Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 5.1e-72 274.2 133 100.0
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 3.7e-54 214.9 129 78.3
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 5.3e-53 211.1 129 76.0
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 5.3e-53 211.1 129 76.0
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 4.5e-52 208.0 109 86.2
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 2.9e-51 205.3 138 71.0
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 1.8e-48 196.1 108 80.6
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 4.4e-47 191.4 106 78.3
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 4.8e-46 188.0 130 67.7
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 4.8e-46 188.0 126 69.0
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 2.4e-45 185.7 107 76.6
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 9.1e-45 183.7 116 72.4
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 1.2e-44 183.3 129 66.7
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 1.2e-44 183.3 117 71.8
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 1.5e-44 183.0 123 67.5
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 2.0e-44 182.6 129 65.9
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 2.0e-44 182.6 123 69.1
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 2.6e-44 182.2 130 66.9
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 3.5e-44 181.8 127 68.5
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 3.5e-44 181.8 115 71.3
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 5.9e-44 181.0 122 68.0
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 1.0e-43 180.3 130 62.3
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 1.7e-43 179.5 125 65.6
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.2e-43 179.1 126 64.3
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.2e-43 179.1 126 62.7
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 2.9e-43 178.7 127 66.1
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.9e-43 178.7 125 64.8
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.9e-43 178.7 125 64.8
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 3.8e-43 178.3 118 69.5
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 3.8e-43 178.3 127 63.8
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 3.8e-43 178.3 130 63.8
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 8.5e-43 177.2 129 62.0
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 8.5e-43 177.2 107 72.9
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.1e-42 176.8 125 64.0
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 1.4e-42 176.4 120 67.5
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 1.4e-42 176.4 116 66.4
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 1.4e-42 176.4 122 66.4
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.4e-42 176.4 123 67.5
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 1.4e-42 176.4 118 66.9
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 1.4e-42 176.4 131 58.8
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 1.4e-42 176.4 126 64.3
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 1.4e-42 176.4 129 65.1
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 1.9e-42 176.0 130 63.8
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 1.9e-42 176.0 124 65.3
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.5e-42 175.6 130 60.8
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 2.5e-42 175.6 129 59.7
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 2.5e-42 175.6 116 67.2
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 2.5e-42 175.6 135 60.0
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 3.2e-42 175.3 128 64.1
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 4.2e-42 174.9 130 62.3
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 7.2e-42 174.1 129 60.5
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 7.2e-42 174.1 129 58.9
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 9.4e-42 173.7 129 63.6
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 9.4e-42 173.7 127 66.9
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 9.4e-42 173.7 128 64.8
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 1.2e-41 173.3 109 67.0
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.2e-41 173.3 132 61.4
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 1.6e-41 172.9 139 58.3
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 2.7e-41 172.2 132 63.6
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 3.6e-41 171.8 130 60.0
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 4.7e-41 171.4 130 60.0
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 6.1e-41 171.0 152 57.9
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 6.1e-41 171.0 119 63.0
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 1.0e-40 170.2 130 60.0
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 1.0e-40 170.2 135 59.3
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 1.4e-40 169.9 129 64.3
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 1.4e-40 169.9 104 68.3
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.3e-40 169.1 104 68.3
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 2.3e-40 169.1 128 62.5
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 3.0e-40 168.7 133 62.4
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 3.0e-40 168.7 104 68.3
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 3.0e-40 168.7 119 64.7
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 3.9e-40 168.3 130 60.8
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 3.9e-40 168.3 138 56.5
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 3.9e-40 168.3 106 67.0
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 3.9e-40 168.3 129 60.5
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 6.7e-40 167.5 117 65.8
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 8.8e-40 167.2 130 60.0
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.5e-39 166.4 123 62.6
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.6e-39 165.6 109 65.1
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 9.7e-39 163.7 129 62.8
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 9.7e-39 163.7 129 62.8
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 9.7e-39 163.7 103 67.0
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 9.7e-39 163.7 129 58.9
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.7e-38 162.9 121 61.2
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 2.2e-38 162.5 131 61.8
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.2e-38 162.5 131 63.4
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 2.8e-38 162.2 131 58.8
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 6.3e-38 161.0 124 59.7
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 8.2e-38 160.6 129 61.2
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.1e-37 160.2 132 54.5
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 1.8e-37 159.5 129 61.2
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 1.8e-37 159.5 131 60.3
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 5.3e-37 157.9 114 64.0
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 5.3e-37 157.9 129 61.2
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 7.0e-37 157.5 129 60.5
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 7.0e-37 157.5 125 58.4
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 9.1e-37 157.1 136 58.8
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 9.1e-37 157.1 129 60.5
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 9.1e-37 157.1 129 60.5
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 9.1e-37 157.1 123 61.0
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 1.2e-36 156.8 129 60.5
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 1.2e-36 156.8 129 60.5
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 1.2e-36 156.8 104 65.4
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 2.0e-36 156.0 104 69.2
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 2.6e-36 155.6 125 56.0
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 2.6e-36 155.6 126 56.3
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 3.5e-36 155.2 129 56.6
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 7.2e-34 147.5 109 59.6
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 7.2e-34 147.5 110 65.5
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 9.4e-34 147.1 104 58.7
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.2e-33 146.7 104 59.6
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.6e-33 146.4 103 60.2
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 2.1e-33 146.0 130 54.6
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 2.1e-33 146.0 105 61.0
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 2.1e-33 146.0 105 61.0
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 2.7e-33 145.6 83 73.5
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 2.7e-33 145.6 105 61.0
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 6.1e-33 144.4 103 62.1
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 4.4e-31 138.3 117 55.6
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 5.7e-31 137.9 102 56.9
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 1.3e-30 136.7 126 51.6
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.2e-28 130.2 129 46.5
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 5.0e-27 124.8 75 69.3
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.1e-26 123.6 70 72.9
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.6e-25 119.8 69 75.4
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 7.5e-23 110.9 127 44.1
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 6.1e-17 91.3 95 48.4
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.4e-16 90.1 71 56.3
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 9.8e-15 84.0 105 42.9
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 3.5e-12 75.5 44 75.0
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 3.4e-07 58.9 59 50.8


User provided reference genes

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