Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.0e-223 778.9 413 100.0
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.2e-129 466.5 309 82.2
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 1.8e-128 463.4 308 81.8
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 7.7e-127 458.0 308 80.8
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.2e-95 354.4 312 65.1
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 3.5e-95 352.8 319 62.4
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 3.3e-93 346.3 312 63.1
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 4.3e-93 345.9 312 62.8
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.1e-92 343.6 308 63.0
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 2.1e-92 343.6 312 63.1
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 8.1e-92 341.7 312 62.5
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 3.4e-82 309.7 340 50.6
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 1.1e-80 304.7 314 54.8
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 4.2e-80 302.8 333 52.9
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 9.3e-80 301.6 312 54.8
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 9.3e-80 301.6 312 57.7
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 7.9e-79 298.5 312 54.8
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.0e-78 298.1 314 52.9
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 3.3e-77 293.1 346 49.1
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 3.8e-73 279.6 314 51.6
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 3.9e-70 269.6 312 51.0
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 9.6e-69 265.0 316 49.1
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 4.8e-68 262.7 308 50.3
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 1.4e-67 261.2 312 49.7
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 3.2e-64 250.0 326 47.9
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 2.1e-63 247.3 312 46.8
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 3.5e-63 246.5 314 46.8
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 3.5e-63 246.5 340 43.5
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.0e-63 245.7 312 46.2
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 3.9e-62 243.0 312 46.2
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.5e-61 241.1 312 45.8
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 3.3e-61 240.0 316 46.2
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 1.3e-60 238.0 312 45.5
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.3e-60 238.0 375 40.5
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.6e-60 237.7 315 44.1
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.1e-60 237.3 314 46.2
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.1e-59 235.0 312 45.5
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 3.1e-59 233.4 310 45.2
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 5.3e-59 232.6 296 47.0
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 6.9e-59 232.3 312 44.9
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 9.0e-59 231.9 312 44.2
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.2e-58 231.5 315 43.2
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.2e-58 231.5 301 47.2
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 2.0e-58 230.7 310 44.2
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 4.5e-58 229.6 315 44.4
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 4.5e-58 229.6 336 42.0
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 5.9e-58 229.2 340 43.8
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 5.9e-58 229.2 273 51.6
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 5.9e-58 229.2 311 45.3
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 5.9e-58 229.2 300 47.0
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 5.0e-57 226.1 298 48.0
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.9e-56 224.2 340 44.7
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 5.5e-56 222.6 311 43.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 5.5e-56 222.6 317 42.6
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.2e-55 221.5 344 41.9
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 3.6e-55 219.9 305 44.3
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 3.6e-55 219.9 318 43.7
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 6.1e-55 219.2 312 42.6
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.8e-54 217.6 339 40.7
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.0e-54 216.9 309 44.3
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 3.9e-54 216.5 350 41.1
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.1e-54 216.1 309 44.7
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 8.7e-54 215.3 321 41.7
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 8.7e-54 215.3 302 42.1
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.9e-53 214.2 313 40.6
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.9e-53 214.2 309 44.0
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.9e-53 214.2 307 43.0
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 5.7e-53 212.6 314 42.4
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 5.7e-53 212.6 315 41.6
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 7.4e-53 212.2 318 40.3
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 2.2e-52 210.7 318 43.4
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 2.2e-52 210.7 307 41.4
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 6.3e-52 209.1 325 40.9
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.1e-51 208.4 238 45.4
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.8e-51 207.6 233 51.1
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.1e-51 206.8 273 46.5
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 6.9e-51 205.7 306 41.2
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.9e-51 205.7 319 41.4
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 6.9e-51 205.7 313 39.3
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 1.2e-50 204.9 314 39.2
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 2.6e-50 203.8 254 48.8
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.6e-50 203.8 276 44.2
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 3.4e-50 203.4 305 38.7
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 4.5e-50 203.0 317 42.0
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.9e-50 202.6 262 42.7
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 5.9e-50 202.6 350 38.6
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.0e-49 201.8 326 40.2
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 2.2e-49 200.7 306 40.2
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.8e-49 199.9 308 39.9
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.0e-49 199.5 277 45.5
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 8.5e-49 198.7 308 38.6
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 1.1e-48 198.4 228 46.9
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 1.9e-48 197.6 314 41.1
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 9.4e-48 195.3 284 41.2
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 9.4e-48 195.3 319 37.0
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 1.2e-47 194.9 316 40.8
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 3.6e-47 193.4 247 46.6
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 4.6e-47 193.0 313 40.6
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 4.6e-47 193.0 247 46.6
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.8e-46 191.0 312 37.8
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 1.8e-46 191.0 341 38.4
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.8e-46 191.0 316 37.7
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 3.0e-46 190.3 312 39.7
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 1.1e-45 188.3 301 41.2
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.0e-45 187.6 281 40.6
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 4.4e-45 186.4 311 37.9
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 9.7e-45 185.3 313 39.9
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.3e-44 182.6 259 40.5
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 1.1e-43 181.8 313 39.9
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.4e-43 181.4 315 37.8
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.2e-42 178.3 193 51.8
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.7e-41 174.5 303 36.6
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 6.5e-41 172.6 315 36.5
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 6.5e-41 172.6 313 36.7
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 8.5e-41 172.2 313 36.7
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 1.4e-40 171.4 300 38.3
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 7.2e-40 169.1 316 36.4
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.2e-39 168.3 309 35.3
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 2.1e-39 167.5 232 43.5
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 2.1e-39 167.5 247 42.1
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 1.0e-38 165.2 305 35.4
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 3.0e-38 163.7 309 36.2
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 5.2e-38 162.9 313 37.4
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 8.8e-38 162.2 309 35.6
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.4e-35 154.8 308 35.7
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.5e-34 149.8 277 39.4
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 5.9e-34 149.4 188 46.3
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 4.7e-31 139.8 303 33.0
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 2.6e-29 134.0 236 34.7
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 5.7e-29 132.9 306 31.4
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 7.5e-29 132.5 145 44.8
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 3.7e-28 130.2 194 40.2
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 3.7e-28 130.2 228 33.3
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 5.3e-27 126.3 326 31.0
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 5.9e-26 122.9 278 32.7
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.5e-21 108.2 160 35.6
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 8.3e-20 102.4 206 34.5
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.4e-19 101.7 192 36.5
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 1.7e-17 94.7 185 32.4
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 3.8e-17 93.6 150 38.0
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 5.0e-17 93.2 157 34.4
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 5.5e-16 89.7 149 34.9
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.2e-15 88.6 180 31.1
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 2.8e-15 87.4 247 28.3
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 3.6e-15 87.0 180 31.1
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.0e-14 85.5 244 28.3
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.5e-13 81.6 82 50.0
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 3.4e-13 80.5 201 28.4
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.4e-13 80.5 138 31.9
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 2.0e-10 71.2 96 45.8
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 8.6e-09 65.9 66 50.0
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 7.3e-08 62.8 104 40.4
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 9.5e-08 62.4 91 38.5


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