Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 6.2e-51 203.8 97 100.0
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 2.3e-45 185.3 96 90.6
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 7.3e-44 180.3 96 88.5
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 7.3e-44 180.3 96 88.5
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 7.3e-44 180.3 96 88.5
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 7.3e-44 180.3 96 88.5
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.6e-43 179.1 96 87.5
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 6.2e-43 177.2 96 87.5
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 6.2e-43 177.2 96 87.5
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-42 176.4 96 86.5
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 1.8e-42 175.6 96 86.5
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.1e-42 174.9 96 86.5
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.5e-41 172.6 96 85.4
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.9e-40 167.5 93 83.9
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.4e-40 167.2 96 80.2
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.1e-39 163.7 96 80.2
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.3e-39 163.3 92 85.9
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 6.0e-38 160.6 87 87.4
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 1.3e-37 159.5 98 82.7
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 1.7e-37 159.1 88 86.4
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 8.7e-37 156.8 96 80.2
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 4.5e-33 144.4 80 80.0
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 3.8e-32 141.4 83 85.5
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 4.2e-31 137.9 77 87.0
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-30 136.3 78 85.9
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.1e-28 129.8 75 85.3
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 2.8e-27 125.2 91 72.5
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 1.8e-26 122.5 76 82.9
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.8e-26 122.5 76 82.9
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-25 119.8 65 87.7
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.5e-25 119.4 96 63.5
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 4.5e-25 117.9 91 69.2
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 9.9e-25 116.7 65 86.2
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.2e-24 115.5 67 83.6
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.8e-24 114.8 65 83.1
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 4.9e-24 114.4 65 84.6
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 6.4e-24 114.0 65 84.6
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 8.4e-24 113.6 65 84.6
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-23 113.2 66 83.3
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 1.4e-23 112.8 65 84.6
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 2.4e-23 112.1 65 83.1
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 5.5e-23 110.9 65 83.1
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 7.1e-23 110.5 65 83.1
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 7.1e-23 110.5 65 83.1
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 9.3e-23 110.2 65 83.1
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 9.3e-23 110.2 65 83.1
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 9.3e-23 110.2 65 83.1
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 1.2e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 6.0e-22 107.5 65 81.5
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 7.9e-22 107.1 65 81.5
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 1.0e-21 106.7 65 81.5
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.0e-21 106.7 65 81.5
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 1.3e-21 106.3 65 81.5
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-21 105.9 96 62.5
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 3.0e-21 105.1 61 83.6
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 3.0e-21 105.1 64 81.2
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 3.9e-21 104.8 65 80.0
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 3.9e-21 104.8 61 80.3
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 2.5e-20 102.1 84 64.3
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 7.4e-20 100.5 56 83.9
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 8.2e-19 97.1 77 64.9
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 1.1e-18 96.7 84 61.9
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.8e-18 95.9 83 61.4
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.4e-18 95.5 84 60.7
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.4e-18 95.5 84 60.7
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.4e-18 95.5 84 60.7
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 4.0e-18 94.7 83 61.4
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 4.0e-18 94.7 83 61.4
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 2.6e-17 92.0 53 83.0
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 3.4e-17 91.7 64 70.3
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-16 89.7 49 87.8
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-16 89.7 71 66.2
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.3e-16 89.7 95 51.6
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 4.9e-16 87.8 81 60.5
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 1.4e-15 86.3 52 80.8
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.4e-15 86.3 63 65.1
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 4.2e-15 84.7 53 75.5
CSS0002325 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 7.1e-15 84.0 51 76.5
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.1e-14 82.4 63 60.3
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 2.7e-14 82.0 44 86.4
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 6.0e-14 80.9 46 80.4
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 7.9e-14 80.5 64 60.9
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 1.8e-13 79.3 63 58.7
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 5.1e-13 77.8 53 66.0
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 8.7e-13 77.0 53 62.3
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 3.3e-12 75.1 46 78.3
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.3e-12 74.7 48 72.9
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.7e-12 73.6 46 76.1
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.6e-11 72.8 53 62.3
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.2e-11 72.4 51 66.7
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.2e-11 72.4 44 79.5
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 4.8e-11 71.2 83 51.8
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 3.1e-10 68.6 46 76.1
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 6.9e-10 67.4 53 62.3
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 9.0e-10 67.0 61 52.5
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 9.0e-10 67.0 96 44.8
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.5e-09 66.2 42 76.2
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 2.6e-09 65.5 40 77.5
Oeu014139.1 Olea europaea HOM05D000533 ORTHO05D007817 5.0e-08 61.2 52 59.6
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 8.5e-08 60.5 33 84.8
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.1e-07 60.1 48 62.5
SHI17974 Sapria himalayana HOM05D000533 ORTHO05D001069 1.1e-07 60.1 38 76.3
ClCG05G017710 Citrullus lanatus HOM05D023369 ORTHO05D025092 5.5e-07 57.8 36 77.8
Cpa.g.sc200.35 Carica papaya HOM05D000533 ORTHO05D001069 2.1e-06 55.8 69 49.3


User provided reference genes

Program Settings