Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G9920.1 Capsicum annuum HOM05D002370 ORTHO05D005166 6.7e-44 180.3 89 100.0
CAN.G1627.3 Capsicum annuum HOM05D002370 ORTHO05D003878 1.2e-32 142.9 120 65.8
CAN.G289.58 Capsicum annuum HOM05D002370 ORTHO05D003878 1.5e-30 136.0 74 90.5
CAN.G606.78 Capsicum annuum HOM05D002370 ORTHO05D003878 1.8e-28 129.0 117 63.2
Solyc01g106770.4 Solanum lycopersicum HOM05D002370 ORTHO05D003878 5.2e-28 127.5 118 61.0
Sopen01g049080 Solanum pennellii HOM05D002370 ORTHO05D003878 5.2e-28 127.5 118 61.0
PGSC0003DMG401025733 Solanum tuberosum HOM05D002370 ORTHO05D003878 5.2e-28 127.5 118 61.0
CAN.G411.96 Capsicum annuum HOM05D002370 ORTHO05D003878 1.2e-27 126.3 117 60.7
Nitab4.5_0000772g0070 Nicotiana tabacum HOM05D002370 ORTHO05D003878 2.6e-27 125.2 118 60.2
CAN.G1627.7 Capsicum annuum HOM05D002370 ORTHO05D003878 2.2e-26 122.1 116 60.3
Peaxi162Scf00016g03243 Petunia axillaris HOM05D002370 ORTHO05D003878 2.2e-26 122.1 117 59.8
Nitab4.5_0010974g0020 Nicotiana tabacum HOM05D002370 ORTHO05D003878 6.3e-26 120.6 118 58.5
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 1.6e-24 115.9 83 71.1
CiPaw.05G021600 Carya illinoinensis HOM05D002370 ORTHO05D003878 7.2e-22 107.1 67 76.1
SalBow6G1889 Salvia bowleyana HOM05D002370 ORTHO05D003878 7.2e-22 107.1 83 65.1
Haze_10320 Corylus avellana HOM05D002370 ORTHO05D003878 9.4e-22 106.7 76 68.4
Dinv09531 Davidia involucrata HOM05D002370 ORTHO05D003878 3.6e-21 104.8 83 62.7
Lj5C222G6 Lonicera japonica HOM05D002370 ORTHO05D003878 4.7e-21 104.4 83 62.7
PSO541G1630 Papaver somniferum HOM05D002370 ORTHO05D003878 4.7e-21 104.4 83 59.0
Manes.07G052660 Manihot esculenta HOM05D002370 ORTHO05D003878 6.1e-21 104.0 83 61.4
COL.COLO4_32473 Corchorus olitorius HOM05D002370 ORTHO05D003878 8.0e-21 103.6 83 62.7
Gorai.008G019100 Gossypium raimondii HOM05D002370 ORTHO05D003878 8.0e-21 103.6 83 62.7
Sed0018886 Sechium edule HOM05D002370 ORTHO05D003878 1.8e-20 102.4 75 68.0
Gohir.A12G018200 Gossypium hirsutum HOM05D002370 ORTHO05D003878 2.3e-20 102.1 83 61.4
Atru.chr4.144 Acer truncatum HOM05D002370 ORTHO05D003878 3.0e-20 101.7 83 61.4
Atru.chr4.155 Acer truncatum HOM05D002370 ORTHO05D003878 3.0e-20 101.7 83 61.4
MELO3C018533.2 Cucumis melo HOM05D002370 ORTHO05D003878 3.0e-20 101.7 75 66.7
Migut.B00477 Erythranthe guttata HOM05D002370 ORTHO05D003878 3.0e-20 101.7 83 61.4
PSO675G3080 Papaver somniferum HOM05D002370 ORTHO05D003878 3.0e-20 101.7 83 56.6
Gohir.D12G018800 Gossypium hirsutum HOM05D002370 ORTHO05D003878 4.0e-20 101.3 83 61.4
Thecc.02G120900 Theobroma cacao HOM05D002370 ORTHO05D003878 4.0e-20 101.3 83 61.4
CiPaw.06G163300 Carya illinoinensis HOM05D002370 ORTHO05D003878 6.8e-20 100.5 83 57.8
ClCG02G007160 Citrullus lanatus HOM05D002370 ORTHO05D003878 6.8e-20 100.5 75 65.3
Ciclev10027661m.g Citrus clementina HOM05D002370 ORTHO05D003878 1.2e-19 99.8 83 59.0
Duzib132G1084 Durio zibethinus HOM05D002370 ORTHO05D003878 1.2e-19 99.8 83 60.2
TWI59G1328 Tripterygium wilfordii HOM05D002370 ORTHO05D003878 1.2e-19 99.8 83 60.2
CsaV3_7G007670 Cucumis sativus L. HOM05D002370 ORTHO05D003878 1.5e-19 99.4 75 64.0
ECA232G2594 Erigeron canadensis HOM05D002370 ORTHO05D003878 1.5e-19 99.4 75 68.0
MSTRG.16667 Avicennia marina HOM05D002370 ORTHO05D003878 3.4e-19 98.2 83 59.0
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 3.4e-19 98.2 83 61.4
TAR381G0773 Trochodendron aralioides HOM05D002370 ORTHO05D003878 3.4e-19 98.2 67 68.7
Lalb_Chr05g0210831 Lupinus albus HOM05D002370 ORTHO05D003878 4.4e-19 97.8 83 56.6
Potri.001G289200 Populus trichocarpa HOM05D002370 ORTHO05D003878 4.4e-19 97.8 83 60.2
PGR142G4285 Punica granatum HOM05D002370 ORTHO05D003878 4.4e-19 97.8 83 57.8
VMungo1215G1081 Vigna mungo HOM05D002370 ORTHO05D003878 4.4e-19 97.8 83 56.6
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea HOM05D002370 ORTHO05D003878 7.5e-19 97.1 75 62.7
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea HOM05D002370 ORTHO05D003878 7.5e-19 97.1 75 62.7
CSS0028039 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 9.8e-19 96.7 83 57.8
Aqoxy6G01518 Aquilegia oxysepala HOM05D002370 ORTHO05D003878 1.3e-18 96.3 67 70.1
DCAR_003604 Daucus carota HOM05D002370 ORTHO05D003878 1.3e-18 96.3 83 56.6
Medtr5g005380 Medicago truncatula HOM05D002370 ORTHO05D003878 1.3e-18 96.3 83 54.2
Lalb_Chr16g0376321 Lupinus albus HOM05D002370 ORTHO05D003878 1.7e-18 95.9 83 53.0
Phvul.002G049900 Phaseolus vulgaris HOM05D002370 ORTHO05D003878 1.7e-18 95.9 83 55.4
Glyma.11G002600 Glycine max HOM05D002370 ORTHO05D003878 2.2e-18 95.5 83 54.2
Potri.009G084500 Populus trichocarpa HOM05D002370 ORTHO05D003878 2.2e-18 95.5 83 57.8
Lj1g0008728 Lotus japonicus HOM05D002370 ORTHO05D003878 2.8e-18 95.1 83 55.4
Psat4g229000 Pisum sativum HOM05D002370 ORTHO05D003878 3.7e-18 94.7 83 54.2
CAN.G1164.4 Capsicum annuum HOM05D002370 ORTHO05D003878 4.8e-18 94.4 47 95.7
Ca_24363_v3 Cicer arietinum L. HOM05D002370 ORTHO05D003878 6.3e-18 94.0 75 60.0
TPR.G8301 Trifolium pratense HOM05D002370 ORTHO05D003878 1.1e-17 93.2 83 54.2
DCAR_021938 Daucus carota HOM05D002370 ORTHO05D003878 1.4e-17 92.8 83 56.6
Glyma.01G241300 Glycine max HOM05D002370 ORTHO05D003878 1.4e-17 92.8 83 53.0
Hma1.2p1_1051F.1_g252210 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 1.4e-17 92.8 83 56.6
unitig_60.g25464 Utricularia gibba HOM05D002370 ORTHO05D003878 1.4e-17 92.8 83 56.6
AL1G57600 Arabidopsis lyrata HOM05D002370 ORTHO05D003878 2.4e-17 92.0 75 62.7
AT1G50030 Arabidopsis thaliana HOM05D002370 ORTHO05D003878 2.4e-17 92.0 75 62.7
Gohir.D01G009100 Gossypium hirsutum HOM05D002370 ORTHO05D003878 2.4e-17 92.0 67 67.2
Gorai.002G011200 Gossypium raimondii HOM05D002370 ORTHO05D003878 2.4e-17 92.0 67 67.2
Oeu025303.1 Olea europaea HOM05D002370 ORTHO05D003878 2.4e-17 92.0 67 70.1
AUR62027030 Chenopodium quinoa HOM05D002370 ORTHO05D003878 3.1e-17 91.7 67 64.2
Rhsim11G0149700 Rhododendron simsii HOM05D002370 ORTHO05D003878 3.1e-17 91.7 83 55.4
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 4.1e-17 91.3 75 62.7
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 5.4e-17 90.9 68 64.7
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 5.4e-17 90.9 68 64.7
HPP92_016412 Vanilla planifolia HOM05D002370 ORTHO05D003878 5.4e-17 90.9 84 53.6
Oeu028915.2 Olea europaea HOM05D002370 ORTHO05D003878 7.0e-17 90.5 75 62.7
CARHR040140 Cardamine hirsuta HOM05D002370 ORTHO05D003878 9.1e-17 90.1 75 60.0
AUR62030874 Chenopodium quinoa HOM05D002370 ORTHO05D003878 9.1e-17 90.1 67 62.7
Thhalv10011174m.g Eutrema salsugineum HOM05D002370 ORTHO05D003878 9.1e-17 90.1 75 61.3
Eucgr.I02503 Eucalyptus grandis HOM05D002370 ORTHO05D003878 1.2e-16 89.7 83 53.0
Sp1g36890 Schrenkiella parvula HOM05D002370 ORTHO05D003878 1.6e-16 89.4 75 60.0
Carub.0001s3921 Capsella rubella HOM05D002370 ORTHO05D003878 2.0e-16 89.0 75 58.7
Sabra09G0065200 Salix brachista HOM05D002370 ORTHO05D003878 2.0e-16 89.0 83 54.2
Hma1.2p1_0661F.1_g197980 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 2.7e-16 88.6 83 53.0
Hma1.2p1_1758F.1_g301190 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 2.7e-16 88.6 83 53.0
BcaC08g43183 Brassica carinata HOM05D002370 ORTHO05D003878 3.5e-16 88.2 75 61.3
A06p03390 Brassica napus HOM05D002370 ORTHO05D003878 3.5e-16 88.2 75 61.3
C06p04900 Brassica napus HOM05D002370 ORTHO05D003878 3.5e-16 88.2 75 61.3
BolC6t35612H Brassica oleracea HOM05D002370 ORTHO05D003878 3.5e-16 88.2 75 61.3
BraA06t23548Z Brassica rapa HOM05D002370 ORTHO05D003878 3.5e-16 88.2 75 61.3
FAN20G2522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 4.5e-16 87.8 83 56.6
FAN27G1380 Fragaria x ananassa HOM05D002370 ORTHO05D003878 4.5e-16 87.8 85 54.1
MD05G1107800 Malus domestica HOM05D002370 ORTHO05D003878 4.5e-16 87.8 75 62.7
vmacro01937 Vaccinium macrocarpon HOM05D002370 ORTHO05D003878 4.5e-16 87.8 83 53.0
BcaB07g33455 Brassica carinata HOM05D002370 ORTHO05D003878 5.9e-16 87.4 75 60.0
FAN24G1227 Fragaria x ananassa HOM05D002370 ORTHO05D003878 5.9e-16 87.4 85 52.9
FvH4_2g03080 Fragaria vesca HOM05D002370 ORTHO05D003878 7.7e-16 87.0 83 55.4
MD10G1112000 Malus domestica HOM05D002370 ORTHO05D003878 7.7e-16 87.0 83 55.4
Prupe.8G151300 Prunus persica HOM05D002370 ORTHO05D003878 7.7e-16 87.0 83 56.6
TAR625G0605 Trochodendron aralioides HOM05D002370 ORTHO05D003878 7.7e-16 87.0 70 58.6
CAN.G411.104 Capsicum annuum HOM05D002370 ORTHO05D003878 1.0e-15 86.7 96 55.2
RcHm_v2.0_Chr6g0247951 Rosa chinensis HOM05D002370 ORTHO05D003878 1.0e-15 86.7 75 61.3
PSO675G4735 Papaver somniferum HOM05D002370 ORTHO05D003878 1.3e-15 86.3 83 51.8
FAN15G3522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 2.3e-15 85.5 83 55.4
CAN.G12816.1 Capsicum annuum HOM05D002370 ORTHO05D003878 2.9e-15 85.1 44 95.5
THA.LOC104826500 Tarenaya hassleriana HOM05D002370 ORTHO05D003878 3.8e-15 84.7 75 57.3
A05p20360 Brassica napus HOM05D002370 ORTHO05D003878 6.6e-15 84.0 75 57.3
BraA05t20943Z Brassica rapa HOM05D002370 ORTHO05D003878 6.6e-15 84.0 75 57.3
BcaB02g11126 Brassica carinata HOM05D002370 ORTHO05D003878 1.9e-14 82.4 75 56.0
BcaC05g27452 Brassica carinata HOM05D002370 ORTHO05D003878 1.9e-14 82.4 75 56.0
C05p34110 Brassica napus HOM05D002370 ORTHO05D003878 1.9e-14 82.4 75 56.0
BolC5t32146H Brassica oleracea HOM05D002370 ORTHO05D003878 1.9e-14 82.4 75 56.0
CDE06G0012 Ceratophyllum demersum HOM05D002370 ORTHO05D003878 2.5e-14 82.0 86 48.8
CSS0026275 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 7.2e-14 80.5 67 59.7
Nn5g30713 Nelumbo nucifera HOM05D002370 ORTHO05D003878 2.1e-13 79.0 64 57.8
GSVIVG01037040001 Vitis vinifera HOM05D002370 ORTHO05D003878 8.9e-12 73.6 83 48.2
CAN.G1164.1 Capsicum annuum HOM05D002370 ORTHO05D003878 1.5e-11 72.8 81 53.1
ATR0753G079 Amborella trichopoda HOM05D002370 ORTHO05D003878 2.6e-11 72.0 84 42.9
PSO732G0082 Papaver somniferum HOM05D002370 ORTHO05D003878 4.4e-11 71.2 70 48.6
EL10Ac9g22169 Beta vulgaris HOM05D002370 ORTHO05D003878 7.5e-11 70.5 51 66.7
Zm00001eb285840 Zea mays HOM05D002370 ORTHO05D003878 4.9e-10 67.8 67 49.3
HanXRQChr04g0107281 Helianthus annuus HOM05D002370 ORTHO05D003878 1.4e-09 66.2 75 50.7
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis HOM05D002370 ORTHO05D003878 5.4e-09 64.3 76 44.7
HanXRQChr04g0107251 Helianthus annuus HOM05D002370 ORTHO05D003878 5.4e-09 64.3 75 52.0
Pp3c6_4910 Physcomitrium patens HOM05D002370 ORTHO05D003878 7.0e-09 63.9 74 41.9
SMO147G0225 Selaginella moellendorffii HOM05D002370 ORTHO05D003878 2.0e-08 62.4 69 46.4
Mapoly0047s0119 Marchantia polymorpha HOM05D002370 ORTHO05D003878 3.5e-08 61.6 73 43.8
Thecc.06G048300 Theobroma cacao HOM05D002370 ORTHO05D037785 5.9e-08 60.8 49 59.2
MD00G1031100 Malus domestica HOM05D002370 ORTHO05D003878 5.0e-07 57.8 82 41.5
SGA_v2.0_scaffold32G12979 Striga asiatica HOM05D002370 ORTHO05D003878 5.0e-07 57.8 83 37.3
SHI03324 Sapria himalayana HOM05D002370 ORTHO05D003878 5.6e-06 54.3 76 40.8


User provided reference genes

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