Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 2.9e-68 261.9 146 100.0
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 1.5e-45 186.4 145 73.1
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 2.6e-45 185.7 145 77.2
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.3e-41 173.3 142 67.6
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.3e-40 168.3 142 64.8
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 1.1e-32 143.7 96 74.0
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.2e-23 110.9 96 63.5
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.4e-22 110.2 96 62.5
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 1.2e-21 107.1 152 47.4
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 2.9e-20 102.4 154 45.5
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 6.5e-20 101.3 93 54.8
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 1.4e-17 93.6 100 51.0
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 1.4e-17 93.6 88 56.8
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.8e-17 93.2 98 52.0
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 2.0e-16 89.7 90 54.4
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 4.8e-15 85.1 140 37.9
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 6.3e-15 84.7 82 61.0
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 2.0e-13 79.7 108 42.6
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 3.5e-13 79.0 89 44.9
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 2.2e-12 76.3 103 42.7
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.9e-12 75.9 139 38.1
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 3.8e-12 75.5 107 41.1
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 6.5e-12 74.7 145 40.0
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.1e-11 73.9 121 40.5
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.5e-11 73.6 129 37.2
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.9e-11 73.2 142 39.4
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 2.5e-11 72.8 95 45.3
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 2.5e-11 72.8 106 39.6
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 3.2e-11 72.4 123 39.8
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 3.2e-11 72.4 92 41.3
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 4.2e-11 72.0 140 34.3
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 5.5e-11 71.6 97 41.2
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 7.2e-11 71.2 104 43.3
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 9.4e-11 70.9 99 42.4
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 1.2e-10 70.5 109 40.4
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 1.2e-10 70.5 108 36.1
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.6e-10 70.1 134 37.3
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.1e-10 69.7 142 35.9
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 2.7e-10 69.3 90 43.3
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 3.6e-10 68.9 95 43.2
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 4.7e-10 68.6 99 41.4
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.7e-10 68.6 97 40.2
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.0e-09 67.4 144 35.4
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 3.0e-09 65.9 126 35.7
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.0e-09 65.9 121 38.8
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 5.2e-09 65.1 82 41.5
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 5.2e-09 65.1 107 37.4
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 6.7e-09 64.7 87 43.7
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 8.8e-09 64.3 121 38.8
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 8.8e-09 64.3 101 40.6
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 1.2e-08 63.9 107 37.4
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 1.5e-08 63.5 77 42.9
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 2.0e-08 63.2 141 31.2
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 3.3e-08 62.4 100 36.0
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 4.4e-08 62.0 100 38.0
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 5.7e-08 61.6 107 34.6
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 7.5e-08 61.2 73 45.2
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 7.5e-08 61.2 98 36.7
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 7.5e-08 61.2 144 29.9
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 9.7e-08 60.8 145 32.4
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 9.7e-08 60.8 84 38.1
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 9.7e-08 60.8 142 33.8
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 1.3e-07 60.5 137 31.4
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 1.3e-07 60.5 146 28.8
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 1.3e-07 60.5 100 40.0
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.2e-07 59.7 87 36.8
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 2.2e-07 59.7 109 33.0
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 3.7e-07 58.9 87 36.8
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 3.7e-07 58.9 105 40.0
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 8.2e-07 57.8 144 32.6
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.1e-06 57.4 49 51.0
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 1.4e-06 57.0 92 40.2
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 1.4e-06 57.0 101 37.6
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.4e-06 56.2 75 37.3


User provided reference genes

Program Settings