Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 2.9e-60 235.3 145 100.0
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 6.9e-38 161.0 145 64.8
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 7.1e-35 151.0 148 65.5
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.1e-33 144.8 146 69.9
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 1.1e-32 143.7 129 63.6
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 4.8e-31 138.3 150 55.3
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 6.9e-30 134.4 147 61.2
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 4.9e-28 128.3 145 57.9
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.8e-23 111.7 149 51.7
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 3.8e-20 102.1 143 46.9
CAN.G981.18 Capsicum annuum HOM05D006536 ORTHO05D005877 7.4e-16 87.8 131 42.7
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.7e-15 85.5 145 40.7
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.3e-15 84.7 152 38.8
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 1.1e-14 84.0 104 48.1
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 6.9e-14 81.3 143 42.7
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.2e-12 76.3 149 39.6
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 3.8e-12 75.5 130 39.2
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.9e-11 73.2 144 38.9
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 4.6e-10 68.6 135 31.1
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 6.1e-10 68.2 146 31.5
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.8e-09 66.6 145 36.6
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.9e-09 65.5 150 31.3
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 5.1e-09 65.1 110 31.8
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 2.5e-08 62.8 142 28.9
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 3.3e-08 62.4 145 33.1
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 4.3e-08 62.0 142 33.1
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 4.3e-08 62.0 147 32.7
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 7.4e-08 61.2 142 34.5
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 9.7e-08 60.8 151 37.7
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 9.7e-08 60.8 52 50.0
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 1.3e-07 60.5 99 40.4
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 1.7e-07 60.1 141 30.5
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 1.7e-07 60.1 135 30.4
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 2.2e-07 59.7 52 50.0
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 3.7e-07 58.9 143 31.5
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 6.3e-07 58.2 153 30.1
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 8.2e-07 57.8 153 32.0
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 1.4e-06 57.0 141 29.1
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 1.4e-06 57.0 141 30.5
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 3.1e-06 55.8 157 31.2
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 4.1e-06 55.5 142 32.4
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 6.9e-06 54.7 142 33.1


User provided reference genes

Program Settings