Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G981.11 Capsicum annuum HOM05D000730 ORTHO05D018831 3.3e-141 505.0 250 100.0
Sopen08g028840 Solanum pennellii HOM05D000730 ORTHO05D000578 2.5e-112 409.1 244 86.1
Solyc08g080520.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 8.0e-111 404.1 244 85.2
Peaxi162Scf00714g00334 Petunia axillaris HOM05D000730 ORTHO05D000578 3.3e-104 382.1 241 82.2
Nitab4.5_0003924g0080 Nicotiana tabacum HOM05D000730 ORTHO05D000578 9.5e-104 380.6 245 80.8
Thecc.03G272900 Theobroma cacao HOM05D000730 ORTHO05D000578 4.1e-54 215.7 250 50.8
Gorai.003G160900 Gossypium raimondii HOM05D000730 ORTHO05D000578 1.7e-52 210.3 250 49.2
Gohir.D03G153300 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.9e-51 206.8 250 48.8
COL.COLO4_05255 Corchorus olitorius HOM05D000730 ORTHO05D000578 9.3e-51 204.5 251 49.4
Duzib068G0713 Durio zibethinus HOM05D000730 ORTHO05D000578 2.1e-50 203.4 251 49.8
Ciclev10023740m.g Citrus clementina HOM05D000730 ORTHO05D000578 1.3e-49 200.7 239 47.7
Manes.01G065400 Manihot esculenta HOM05D000730 ORTHO05D000578 1.3e-49 200.7 248 46.8
Haze_08931 Corylus avellana HOM05D000730 ORTHO05D000578 3.3e-48 196.1 245 47.8
Sabra01G0081900 Salix brachista HOM05D000730 ORTHO05D000578 5.7e-48 195.3 248 48.8
Oeu029784.2 Olea europaea HOM05D000730 ORTHO05D000578 1.3e-47 194.1 242 46.7
SalBow6G3932 Salvia bowleyana HOM05D000730 ORTHO05D000578 4.8e-47 192.2 247 45.7
Migut.A00938 Erythranthe guttata HOM05D000730 ORTHO05D000578 8.2e-47 191.4 242 47.5
Potri.001G108400 Populus trichocarpa HOM05D000730 ORTHO05D000578 8.2e-47 191.4 249 48.2
Cc08_g14160 Coffea canephora HOM05D000730 ORTHO05D000578 1.1e-46 191.0 228 46.9
DCAR_004665 Daucus carota HOM05D000730 ORTHO05D000578 2.4e-46 189.9 254 44.9
Nn6g34206 Nelumbo nucifera HOM05D000730 ORTHO05D000578 6.5e-44 181.8 251 46.2
QL12p017589 Quercus lobata HOM05D000730 ORTHO05D000578 1.1e-43 181.0 248 42.7
GSVIVG01019827001 Vitis vinifera HOM05D000730 ORTHO05D000578 1.4e-43 180.6 234 45.3
TAR375G0386 Trochodendron aralioides HOM05D000730 ORTHO05D000578 1.9e-43 180.3 256 45.7
Actinidia02031 Actinidia chinensis HOM05D000730 ORTHO05D000578 2.5e-43 179.9 247 44.1
Sp6g05800 Schrenkiella parvula HOM05D000730 ORTHO05D000578 4.2e-43 179.1 241 44.4
TWI81G0743 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 7.2e-43 178.3 255 43.5
AL6G46270 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 9.4e-43 177.9 244 43.0
Prupe.5G093000 Prunus persica HOM05D000730 ORTHO05D000578 2.7e-42 176.4 251 43.0
SGA_v2.0_scaffold343G49460 Striga asiatica HOM05D000730 ORTHO05D000578 1.0e-41 174.5 238 44.5
ECA246G5324 Erigeron canadensis HOM05D000730 ORTHO05D000578 2.3e-41 173.3 246 45.9
AT4G11670 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 3.0e-41 172.9 244 42.6
HanXRQChr06g0165441 Helianthus annuus HOM05D000730 ORTHO05D000578 8.8e-41 171.4 246 44.3
MD00G1110400 Malus domestica HOM05D000730 ORTHO05D000578 1.5e-40 170.6 248 43.1
Lsat_1_v5_gn_3_8441 Lactuca sativa HOM05D000730 ORTHO05D000578 4.4e-40 169.1 245 45.3
THA.LOC104806377 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 4.4e-40 169.1 246 41.9
Lj8A236G37 Lonicera japonica HOM05D000730 ORTHO05D033907 6.3e-39 165.2 266 43.6
Sc22g0000270 Simmondsia chinensis HOM05D000730 ORTHO05D000578 8.2e-39 164.9 249 43.4
A09p27470 Brassica napus HOM05D000730 ORTHO05D000578 1.1e-38 164.5 236 42.4
CARHR254700 Cardamine hirsuta HOM05D000730 ORTHO05D000578 1.1e-38 164.5 244 41.0
BraA09t38315Z Brassica rapa HOM05D000730 ORTHO05D000578 3.1e-38 162.9 236 42.4
CANSAT21G0309 Cannabis sativa HOM05D000730 ORTHO05D000578 3.4e-37 159.5 252 41.7
Thhalv10028371m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 5.9e-37 158.7 217 43.8
C09p34790 Brassica napus HOM05D000730 ORTHO05D000578 1.0e-36 157.9 236 42.8
AUR62017277 Chenopodium quinoa HOM05D000730 ORTHO05D000578 1.0e-36 157.9 246 40.7
ClCG00G000280 Citrullus lanatus HOM05D000730 ORTHO05D000578 6.5e-36 155.2 246 39.8
ClCG00G001770 Citrullus lanatus HOM05D000730 ORTHO05D000578 6.5e-36 155.2 246 39.8
Aqoxy5G03962 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 2.5e-35 153.3 246 37.8
RcHm_v2.0_Chr7g0198971 Rosa chinensis HOM05D000730 ORTHO05D000578 9.4e-35 151.4 243 41.2
MELO3C014023.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.6e-34 150.6 251 39.0
BolC9t56324H Brassica oleracea HOM05D000730 ORTHO05D000578 1.0e-33 147.9 224 42.9
Eucgr.E00552 Eucalyptus grandis HOM05D000730 ORTHO05D000578 1.4e-33 147.5 242 40.5
FvH4_5g01750 Fragaria vesca HOM05D000730 ORTHO05D000578 3.9e-33 146.0 250 37.2
Sed0026891 Sechium edule HOM05D000730 ORTHO05D000578 1.1e-32 144.4 200 41.5
Gohir.A03G018300 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.3e-31 141.0 192 45.3
FAN04G2748 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.1e-30 137.9 259 36.3
ATR0757G158 Amborella trichopoda HOM05D000730 ORTHO05D000578 1.4e-30 137.5 241 34.9
Aa31LG9G10680 Aethionema arabicum HOM05D000730 ORTHO05D000578 1.8e-30 137.1 219 39.7
PSO339G1614 Papaver somniferum HOM05D000730 ORTHO05D000578 4.1e-30 136.0 226 38.9
PSO384G0089 Papaver somniferum HOM05D000730 ORTHO05D000578 4.1e-30 136.0 226 38.9
PGR042G2616 Punica granatum HOM05D000730 ORTHO05D000578 4.1e-30 136.0 240 38.8
MBI12_g43910_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 3.8e-28 129.4 248 36.7
AUR62010634 Chenopodium quinoa HOM05D000730 ORTHO05D000578 6.5e-28 128.6 231 36.8
BcaC04g21166 Brassica carinata HOM05D000730 ORTHO05D000578 1.9e-27 127.1 240 37.5
Lalb_Chr19g0132961 Lupinus albus HOM05D000730 ORTHO05D000578 3.2e-27 126.3 276 33.7
HPP92_007385 Vanilla planifolia HOM05D000730 ORTHO05D000578 3.2e-27 126.3 252 35.7
Carub.0006s0590 Capsella rubella HOM05D000730 ORTHO05D000578 4.2e-27 125.9 280 33.9
Phvul.011G201400 Phaseolus vulgaris HOM05D000730 ORTHO05D000578 7.2e-27 125.2 275 35.3
Aqoxy2G00416 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 1.6e-26 124.0 267 35.6
Prupe.2G042100 Prunus persica HOM05D000730 ORTHO05D000578 1.6e-26 124.0 279 33.7
Gorai.009G298800 Gossypium raimondii HOM05D000730 ORTHO05D000578 2.1e-26 123.6 271 34.7
Sp6g35900 Schrenkiella parvula HOM05D000730 ORTHO05D000578 2.1e-26 123.6 279 32.6
VMungo1127G0979 Vigna mungo HOM05D000730 ORTHO05D000578 3.6e-26 122.9 277 33.9
FAN08G1404 Fragaria x ananassa HOM05D000730 ORTHO05D000578 4.7e-26 122.5 258 33.7
Lj3g0012169 Lotus japonicus HOM05D000730 ORTHO05D000578 4.7e-26 122.5 271 32.1
TPR.G8523 Trifolium pratense HOM05D000730 ORTHO05D000578 4.7e-26 122.5 274 32.8
COL.COLO4_20721 Corchorus olitorius HOM05D000730 ORTHO05D000578 6.1e-26 122.1 272 34.6
FvH4_7g03630 Fragaria vesca HOM05D000730 ORTHO05D000578 6.1e-26 122.1 285 33.3
FAN06G3967 Fragaria x ananassa HOM05D000730 ORTHO05D000578 6.1e-26 122.1 285 33.3
Gohir.D05G284200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 6.1e-26 122.1 269 34.2
Lalb_Chr03g0032161 Lupinus albus HOM05D000730 ORTHO05D000578 6.1e-26 122.1 276 33.7
arahy.Tifrunner.gnm1.ann1.8I68MQ Arachis hypogaea HOM05D000730 ORTHO05D000578 8.0e-26 121.7 276 33.0
arahy.Tifrunner.gnm1.ann1.H567TY Arachis hypogaea HOM05D000730 ORTHO05D000578 8.0e-26 121.7 276 33.0
CARHR206170 Cardamine hirsuta HOM05D000730 ORTHO05D000578 8.0e-26 121.7 280 32.9
Gohir.A05G283200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.0e-25 121.3 271 34.3
Psat4g145160 Pisum sativum HOM05D000730 ORTHO05D000578 1.0e-25 121.3 271 32.5
Thecc.10G145500 Theobroma cacao HOM05D000730 ORTHO05D000578 1.0e-25 121.3 267 34.5
FAN10G2667 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.4e-25 120.9 273 33.0
RcHm_v2.0_Chr1g0326411 Rosa chinensis HOM05D000730 ORTHO05D000578 1.4e-25 120.9 273 32.6
CSS0025631 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 1.8e-25 120.6 276 34.1
Duzib114G0880 Durio zibethinus HOM05D000730 ORTHO05D000578 1.8e-25 120.6 263 33.1
Glyma.15G230600 Glycine max HOM05D000730 ORTHO05D000578 2.3e-25 120.2 278 33.5
CsaV3_3G003550 Cucumis sativus L. HOM05D000730 ORTHO05D000578 3.0e-25 119.8 251 33.5
Glyma.13G192900 Glycine max HOM05D000730 ORTHO05D000578 3.0e-25 119.8 276 33.7
EL10Ac5g12746 Beta vulgaris HOM05D000730 ORTHO05D000578 4.0e-25 119.4 256 35.2
Duzib128G1742 Durio zibethinus HOM05D000730 ORTHO05D000578 5.2e-25 119.0 267 33.7
Medtr8g040190 Medicago truncatula HOM05D000730 ORTHO05D000578 5.2e-25 119.0 275 32.7
Nn7g36786 Nelumbo nucifera HOM05D000730 ORTHO05D000578 5.2e-25 119.0 264 35.6
AL6G17130 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 6.7e-25 118.6 280 32.9
SGA_v2.0_scaffold124G33604 Striga asiatica HOM05D000730 ORTHO05D000578 2.0e-24 117.1 272 31.6
AT5G06970 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 2.6e-24 116.7 280 31.8
CANSAT56G2780 Cannabis sativa HOM05D000730 ORTHO05D000578 2.6e-24 116.7 279 33.0
Lj9A659G48 Lonicera japonica HOM05D000730 ORTHO05D000578 3.3e-24 116.3 273 33.3
Zm00001eb073730 Zea mays HOM05D000730 ORTHO05D000578 3.3e-24 116.3 254 34.3
TWI60G0879 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 4.4e-24 115.9 291 33.3
MD02G1278500 Malus domestica HOM05D000730 ORTHO05D000578 5.7e-24 115.5 281 32.0
MD07G1046600 Malus domestica HOM05D000730 ORTHO05D000578 9.7e-24 114.8 273 31.9
BcaC06g32528 Brassica carinata HOM05D000730 ORTHO05D000578 1.3e-23 114.4 280 31.8
FAN18G2185 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.3e-23 114.4 250 34.0
Mapoly0125s0045 Marchantia polymorpha HOM05D000730 ORTHO05D000578 1.3e-23 114.4 249 34.5
Sc10g0004540 Simmondsia chinensis HOM05D000730 ORTHO05D000578 1.7e-23 114.0 296 32.4
Manes.04G156900 Manihot esculenta HOM05D000730 ORTHO05D000578 3.7e-23 112.8 276 33.7
Cc00_g07550 Coffea canephora HOM05D000730 ORTHO05D000578 4.8e-23 112.5 273 31.9
Cpa.g.sc169.47 Carica papaya HOM05D000730 ORTHO05D000578 6.3e-23 112.1 274 33.9
Pp3c7_24310 Physcomitrium patens HOM05D000730 ORTHO05D000578 8.2e-23 111.7 249 32.5
THA.LOC104799323 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 8.2e-23 111.7 280 32.1
Atru.chr12.1287 Acer truncatum HOM05D000730 ORTHO05D000578 1.1e-22 111.3 276 31.5
Potri.001G030100 Populus trichocarpa HOM05D000730 ORTHO05D000578 1.1e-22 111.3 283 32.9
SMO116G0331 Selaginella moellendorffii HOM05D000730 ORTHO05D000578 1.1e-22 111.3 250 31.6
Os04g0568850 Oryza sativa ssp. japonica HOM05D000730 ORTHO05D018831 1.4e-22 110.9 209 35.4
Dinv44710 Davidia involucrata HOM05D000730 ORTHO05D000578 1.8e-22 110.5 262 34.4
CDE09G0864 Ceratophyllum demersum HOM05D000730 ORTHO05D000578 2.4e-22 110.2 235 35.3
Sed0013589 Sechium edule HOM05D000730 ORTHO05D000578 3.1e-22 109.8 281 31.7
Lalb_Chr01g0007391 Lupinus albus HOM05D000730 ORTHO05D000578 5.3e-22 109.0 278 31.3
Hund28788 Selenicereus undatus HOM05D000730 ORTHO05D018831 5.3e-22 109.0 178 38.8
Hund28789 Selenicereus undatus HOM05D000730 ORTHO05D018831 5.3e-22 109.0 178 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4217 Anthoceros agrestis HOM05D000730 ORTHO05D000578 7.0e-22 108.6 269 30.1
DCAR_006604 Daucus carota HOM05D000730 ORTHO05D000578 1.2e-21 107.8 282 31.9
Eucgr.J00067 Eucalyptus grandis HOM05D000730 ORTHO05D000578 1.6e-21 107.5 285 31.6
Rhsim07G0068600 Rhododendron simsii HOM05D000730 ORTHO05D000578 2.0e-21 107.1 280 31.8
Solyc01g096540.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 2.0e-21 107.1 281 30.6
Thhalv10012512m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 4.5e-21 105.9 275 32.0
FAN03G3014 Fragaria x ananassa HOM05D000730 ORTHO05D000578 4.5e-21 105.9 264 31.8
Sopen01g040270 Solanum pennellii HOM05D000730 ORTHO05D000578 4.5e-21 105.9 281 30.2
Lsat_1_v5_gn_7_31081 Lactuca sativa HOM05D000730 ORTHO05D000578 7.7e-21 105.1 277 32.5
Actinidia06224 Actinidia chinensis HOM05D000730 ORTHO05D000578 1.0e-20 104.8 277 31.8
CiPaw.13G015400 Carya illinoinensis HOM05D000730 ORTHO05D000578 1.0e-20 104.8 290 30.3
PGR044G0565 Punica granatum HOM05D000730 ORTHO05D000578 1.0e-20 104.8 285 30.9
CAN.G134.13 Capsicum annuum HOM05D000730 ORTHO05D000578 1.3e-20 104.4 276 30.4
GSVIVG01036645001 Vitis vinifera HOM05D000730 ORTHO05D000578 1.3e-20 104.4 255 32.5
BcaNung04208 Brassica carinata HOM05D000730 ORTHO05D000578 1.7e-20 104.0 273 30.0
Migut.B01242 Erythranthe guttata HOM05D000730 ORTHO05D000578 1.7e-20 104.0 210 33.3
Peaxi162Scf00082g00018 Petunia axillaris HOM05D000730 ORTHO05D000578 1.7e-20 104.0 273 30.8
C09p69110 Brassica napus HOM05D000730 ORTHO05D000578 6.5e-20 102.1 278 30.2
BolC9t59655H Brassica oleracea HOM05D000730 ORTHO05D000578 6.5e-20 102.1 278 30.2
CsaV3_5G036910 Cucumis sativus L. HOM05D000730 ORTHO05D000578 6.5e-20 102.1 281 30.2
A10p28770 Brassica napus HOM05D000730 ORTHO05D000578 1.5e-19 100.9 273 29.7
MELO3C012490.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.5e-19 100.9 281 30.2
HanXRQChr04g0119551 Helianthus annuus HOM05D000730 ORTHO05D000578 1.5e-19 100.9 284 32.4
MBI19_g36134_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 1.5e-19 100.9 249 32.1
CBR_g23529 Chara braunii HOM05D000730 ORTHO05D000578 1.9e-19 100.5 249 30.9
CiPaw.11G139500 Carya illinoinensis HOM05D000730 ORTHO05D000578 4.2e-19 99.4 162 40.7
Hund15746 Selenicereus undatus HOM05D000730 ORTHO05D000578 9.4e-19 98.2 263 33.8
unitig_52.g17227 Utricularia gibba HOM05D000730 ORTHO05D018831 1.6e-18 97.4 107 46.7
Ca_23976_v3 Cicer arietinum L. HOM05D000730 ORTHO05D000578 3.6e-18 96.3 239 31.4
Ah.12g057520 Amaranthus hybridus HOM05D000730 ORTHO05D000578 1.8e-17 94.0 114 42.1
BraA10t44924Z Brassica rapa HOM05D000730 ORTHO05D000578 2.3e-17 93.6 281 28.8
CSS0030717 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D018831 6.8e-17 92.0 77 53.2
CSS0042423 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D018831 6.8e-17 92.0 77 53.2
AUR62031742 Chenopodium quinoa HOM05D000730 ORTHO05D000578 1.5e-16 90.9 264 31.8
ATR1096G139 Amborella trichopoda HOM05D000730 ORTHO05D000578 3.4e-16 89.7 211 30.3
AUR62032627 Chenopodium quinoa HOM05D000730 ORTHO05D000578 3.4e-16 89.7 235 32.3
Zm00001eb285140 Zea mays HOM05D000730 ORTHO05D000578 7.5e-16 88.6 272 28.7
ECA236G3986 Erigeron canadensis HOM05D000730 ORTHO05D000578 9.8e-16 88.2 280 29.6
Nitab4.5_0002838g0080 Nicotiana tabacum HOM05D000730 ORTHO05D000578 9.8e-16 88.2 274 28.8
Nitab4.5_0005420g0020 Nicotiana tabacum HOM05D000730 ORTHO05D000578 9.8e-16 88.2 274 28.8
Haze_03002 Corylus avellana HOM05D000730 ORTHO05D000578 1.3e-15 87.8 300 27.3
Ciclev10003518m.g Citrus clementina HOM05D000730 ORTHO05D000578 1.7e-15 87.4 268 28.0
EL10Ac2g02767 Beta vulgaris HOM05D000730 ORTHO05D000578 1.2e-13 81.3 264 30.7
Hma1.2p1_1468F.1_g285520 Hydrangea macrophylla HOM05D000730 ORTHO05D018831 1.2e-13 81.3 116 38.8
ClCG10G003540 Citrullus lanatus HOM05D000730 ORTHO05D000578 6.5e-12 75.5 59 55.9
Cfa012119 Carpinus fangiana HOM05D000730 ORTHO05D000578 1.5e-11 74.3 79 58.2
Atru.chr9.1560 Acer truncatum HOM05D000730 ORTHO05D000578 3.2e-11 73.2 79 55.7
CSS0007649 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D033907 2.1e-10 70.5 163 34.4
CSS0026791 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D033907 2.1e-10 70.5 163 34.4
SalBow5G1057 Salvia bowleyana HOM05D000730 ORTHO05D000578 2.1e-10 70.5 297 25.6
Aa31sc24G200 Aethionema arabicum HOM05D000730 ORTHO05D000578 1.8e-09 67.4 234 26.5
vmacro07437 Vaccinium macrocarpon HOM05D000730 ORTHO05D000578 1.8e-09 67.4 280 27.1
Sabra01G0021600 Salix brachista HOM05D000730 ORTHO05D000578 2.0e-08 63.9 294 27.6
Oeu064135.2 Olea europaea HOM05D000730 ORTHO05D000578 4.4e-08 62.8 205 27.3
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 1.7e-07 60.8 176 27.8
ClCG05G026970 Citrullus lanatus HOM05D000730 ORTHO05D000578 1.4e-06 57.8 239 25.1
HPP92_021195 Vanilla planifolia HOM05D000730 ORTHO05D000578 1.4e-06 57.8 172 30.2
SHI11370 Sapria himalayana HOM05D000730 ORTHO05D000578 1.8e-06 57.4 106 38.7


User provided reference genes

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