Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 4.0e-273 944.1 462 100.0
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.1e-214 750.0 463 80.8
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 2.3e-204 715.7 458 78.4
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 4.1e-201 704.9 450 78.2
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 7.7e-200 700.7 450 77.6
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 8.5e-199 697.2 434 80.2
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.1e-198 696.8 452 77.0
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.3e-196 689.1 484 72.9
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.6e-195 685.6 455 75.6
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.6e-192 676.4 453 73.3
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.6e-192 676.4 453 75.1
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 5.9e-192 674.5 456 75.7
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 1.3e-191 673.3 473 70.8
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 8.5e-191 670.6 453 74.0
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.2e-190 668.3 454 74.0
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 5.5e-190 667.9 456 74.1
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 2.7e-189 665.6 460 73.3
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.6e-189 665.2 453 73.3
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 4.7e-189 664.8 453 73.7
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 6.1e-189 664.5 453 73.5
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 8.0e-189 664.1 453 73.5
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.0e-188 663.7 455 73.4
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.4e-188 663.3 458 73.4
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.8e-188 662.9 456 73.2
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.8e-188 662.9 456 73.2
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 2.3e-188 662.5 452 72.3
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 5.2e-188 661.4 461 73.5
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 8.8e-188 660.6 457 72.0
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 8.8e-188 660.6 451 74.5
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 2.0e-187 659.4 419 78.3
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.6e-187 659.1 457 71.8
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.6e-187 659.1 436 74.5
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 3.3e-187 658.7 485 69.5
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 3.3e-187 658.7 466 71.5
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 4.4e-187 658.3 486 69.1
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 5.7e-187 657.9 452 73.0
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 2.2e-186 656.0 456 71.9
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 2.8e-186 655.6 437 74.1
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 4.8e-186 654.8 458 72.3
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 1.4e-185 653.3 454 72.0
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.4e-185 653.3 437 75.5
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 1.8e-185 652.9 452 71.2
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.4e-185 652.5 457 71.1
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 5.3e-185 651.4 446 71.5
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 9.1e-185 650.6 456 70.6
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 1.2e-184 650.2 454 70.9
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.7e-184 649.0 454 71.4
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 2.7e-184 649.0 456 71.9
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 4.5e-184 648.3 458 70.3
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 7.7e-184 647.5 456 71.5
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 1.3e-183 646.7 458 70.5
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 1.7e-183 646.4 458 71.4
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.7e-183 646.4 456 70.6
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.9e-183 645.6 459 71.0
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 8.5e-183 644.0 456 71.1
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.5e-182 643.3 456 69.3
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 3.2e-182 642.1 459 69.5
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 3.2e-182 642.1 459 70.8
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 5.5e-182 641.3 455 70.8
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.6e-181 639.8 463 70.2
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.6e-181 638.6 462 69.5
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 4.7e-181 638.3 460 68.0
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.0e-180 637.1 472 68.4
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.0e-180 637.1 459 69.3
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 1.0e-180 637.1 456 69.3
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.4e-180 636.7 455 71.4
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 3.4e-179 632.1 452 68.8
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 3.4e-179 632.1 461 67.0
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.8e-178 629.0 458 65.9
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 4.8e-178 628.2 451 69.4
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 1.8e-177 626.3 454 69.2
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 4.1e-177 625.2 463 66.5
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 2.7e-176 622.5 452 68.8
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 1.0e-175 620.5 451 67.2
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.0e-175 620.5 471 65.4
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.8e-175 618.6 452 67.5
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.9e-174 616.3 452 67.3
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 7.2e-174 614.4 451 68.1
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.6e-173 612.1 450 68.7
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 4.7e-173 611.7 452 67.0
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 8.0e-173 610.9 430 68.8
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 4.0e-172 608.6 452 66.8
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.2e-171 607.1 452 66.8
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.5e-171 606.7 452 67.3
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 2.0e-171 606.3 471 64.3
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.3e-170 603.6 457 68.7
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.4e-169 599.4 481 63.0
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 5.4e-169 598.2 472 64.4
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 2.0e-168 596.3 448 66.3
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 4.5e-168 595.1 505 63.8
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.1e-166 590.5 416 72.1
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 7.3e-166 587.8 485 62.1
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 8.0e-165 584.3 392 75.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.0e-164 583.9 483 64.4
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 5.4e-161 571.6 436 66.3
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 3.0e-159 565.8 432 67.6
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 6.6e-159 564.7 476 59.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 3.3e-158 562.4 396 68.2
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.1e-153 547.4 416 66.3
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 3.0e-151 539.3 384 71.6
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 2.0e-147 526.6 461 61.6
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.2e-145 519.2 467 58.7
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 7.8e-144 514.6 452 58.8
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.5e-136 489.2 324 75.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 7.8e-136 488.0 440 56.1
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 1.3e-135 487.3 459 53.8
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 8.6e-135 484.6 446 53.8
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 2.5e-134 483.0 431 55.5
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 4.3e-134 482.3 443 54.0
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 4.8e-125 452.2 279 77.8
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 3.9e-119 432.6 452 54.0
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 6.7e-103 378.6 450 42.9
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 9.3e-97 358.2 451 48.8
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.2e-91 341.3 453 42.4
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 4.5e-91 339.3 389 52.2
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 4.1e-84 316.2 317 56.2
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.2e-77 293.9 157 85.4
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.4e-76 291.2 496 37.1
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 1.4e-63 248.1 335 44.5
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 7.2e-57 225.7 108 94.4
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 8.8e-55 218.8 374 40.4
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 5.7e-54 216.1 154 69.5
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 2.2e-45 187.6 109 85.3
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.5e-41 174.9 388 34.0
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 8.3e-37 159.1 128 65.6
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 2.5e-33 147.5 104 70.2
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 4.9e-29 133.3 85 67.1
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 6.6e-26 122.9 127 48.8
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.2e-22 112.1 83 65.1
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 4.9e-21 106.7 67 68.7
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 8.4e-21 105.9 125 52.8
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 7.1e-20 102.8 120 54.2
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 2.7e-19 100.9 104 53.8
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 4.6e-19 100.1 75 64.0
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 1.3e-18 98.6 223 30.0
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 3.3e-17 94.0 67 67.2
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.3e-10 72.0 49 69.4
arahy.Tifrunner.gnm1.ann1.V8UVVM Arachis hypogaea HOM05D005577 ORTHO05D086716 1.5e-06 58.5 43 65.1


User provided reference genes

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