Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.3e-171 606.3 307 100.0
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 3.4e-143 511.9 314 85.0
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 4.4e-143 511.5 314 85.0
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 6.2e-129 464.5 294 83.0
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.0e-128 463.8 293 82.6
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.8e-112 409.8 327 67.6
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 8.1e-105 384.4 314 65.6
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.2e-100 370.5 235 83.0
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 7.8e-100 367.9 312 62.8
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.9e-98 363.2 308 63.0
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 2.9e-94 349.4 308 62.7
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 7.9e-92 341.3 308 60.4
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 8.4e-86 321.2 327 55.7
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.7e-84 316.2 322 53.4
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 4.6e-84 315.5 331 53.2
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 2.1e-81 306.6 315 55.9
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.4e-80 303.9 322 52.2
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 9.0e-80 301.2 324 53.1
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.0e-78 297.7 335 49.9
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 1.7e-78 297.0 316 50.3
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 4.9e-78 295.4 321 53.6
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 2.5e-77 293.1 324 50.9
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 2.1e-76 290.0 321 50.8
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 6.0e-76 288.5 321 50.2
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 2.3e-75 286.6 320 49.7
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 8.7e-75 284.6 339 48.7
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 3.3e-74 282.7 310 52.9
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 9.6e-74 281.2 309 55.3
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 4.8e-73 278.9 315 48.6
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 4.8e-73 278.9 325 47.4
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.1e-72 277.7 318 49.1
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.1e-72 277.7 323 50.2
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 1.4e-72 277.3 323 49.2
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 1.8e-72 276.9 312 50.0
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 4.1e-72 275.8 323 50.2
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 6.9e-72 275.0 315 52.4
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.6e-71 273.1 322 50.0
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.4e-71 272.7 318 49.4
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 3.4e-71 272.7 305 49.5
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 3.4e-71 272.7 321 48.6
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.7e-70 270.4 316 50.6
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.8e-70 269.2 318 49.1
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.1e-69 267.7 316 49.4
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 1.1e-69 267.7 309 48.9
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 1.1e-69 267.7 313 47.6
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.9e-69 266.9 318 48.7
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 5.5e-69 265.4 313 48.6
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.1e-68 263.5 316 48.7
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 3.6e-68 262.7 327 48.3
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 7.9e-68 261.5 321 46.4
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 2.3e-67 260.0 330 47.3
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 3.9e-67 259.2 317 47.6
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 1.5e-66 257.3 314 48.1
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 1.5e-66 257.3 321 47.4
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.5e-66 257.3 310 47.4
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 2.5e-66 256.5 318 44.7
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 4.3e-66 255.8 323 47.4
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 1.6e-65 253.8 334 44.3
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 2.2e-65 253.4 317 46.1
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 1.4e-64 250.8 295 49.8
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 1.4e-64 250.8 313 47.3
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 1.8e-64 250.4 320 45.9
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 3.1e-64 249.6 322 47.2
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 4.1e-64 249.2 316 46.8
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 5.3e-64 248.8 319 43.6
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.2e-63 247.7 337 46.3
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.2e-63 247.7 319 46.7
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.5e-63 245.7 320 46.6
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 7.7e-63 245.0 335 43.6
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 7.7e-63 245.0 321 43.9
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 1.3e-62 244.2 331 46.2
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 3.8e-62 242.7 317 46.4
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 5.0e-62 242.3 307 44.6
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 3.2e-61 239.6 316 45.9
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 9.4e-61 238.0 318 43.1
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 2.1e-60 236.9 318 43.4
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 2.1e-60 236.9 318 42.5
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 2.1e-60 236.9 312 47.4
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 2.1e-60 236.9 325 45.8
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.1e-60 236.9 325 45.5
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 2.7e-60 236.5 318 42.1
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 4.6e-60 235.7 319 42.6
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 3.0e-59 233.0 304 43.4
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 6.7e-59 231.9 314 43.9
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 5.7e-58 228.8 306 45.1
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 5.7e-58 228.8 306 45.1
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 2.8e-57 226.5 199 58.8
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 8.2e-57 224.9 317 42.3
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 1.1e-56 224.6 311 44.1
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.5e-55 220.7 306 44.4
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 5.9e-55 218.8 318 40.9
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 2.9e-54 216.5 295 45.1
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.8e-54 216.1 307 45.9
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 4.2e-53 212.6 313 44.7
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 4.2e-53 212.6 322 41.0
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 9.4e-53 211.5 310 43.9
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 3.0e-51 206.5 310 40.0
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 1.3e-49 201.1 296 43.9
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 2.4e-48 196.8 275 41.1
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 2.9e-46 189.9 186 55.4
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.9e-45 187.2 181 53.0
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 6.7e-43 178.7 326 41.1
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 6.5e-38 162.2 389 31.4
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 3.1e-32 143.3 150 48.7
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 1.6e-31 141.0 314 36.0
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 1.3e-30 137.9 342 31.6
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 2.9e-30 136.7 292 34.6
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.8e-30 136.3 137 52.6
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 1.5e-29 134.4 310 35.5
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 1.1e-24 118.2 144 50.0
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 7.0e-24 115.5 308 33.1
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 2.5e-21 107.1 89 58.4
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 4.0e-19 99.8 232 34.1
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 9.8e-18 95.1 73 64.4
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 1.1e-16 91.7 385 24.4
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 7.8e-15 85.5 78 55.1
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 6.6e-14 82.4 97 52.6
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 2.5e-13 80.5 162 37.0
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 1.2e-12 78.2 78 56.4
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 2.1e-12 77.4 355 24.2
SalBow1G6530 Salvia bowleyana HOM05D006207 ORTHO05D007868 1.8e-11 74.3 104 44.2
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 2.3e-11 73.9 79 48.1
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 4.6e-07 59.7 70 38.6


User provided reference genes

Program Settings