Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G965.8 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-26 122.5 61 100.0
CAN.G1045.12 Capsicum annuum HOM05D008285 ORTHO05D010431 4.8e-25 117.1 61 96.7
CAN.G1045.15 Capsicum annuum HOM05D008285 ORTHO05D010431 4.8e-25 117.1 61 96.7
CAN.G222.14 Capsicum annuum HOM05D008285 ORTHO05D010431 4.8e-25 117.1 61 96.7
CAN.G413.8 Capsicum annuum HOM05D008285 ORTHO05D010431 4.8e-25 117.1 61 96.7
CAN.G1431.2 Capsicum annuum HOM05D008285 ORTHO05D010431 1.4e-24 115.5 61 95.1
CAN.G8.24 Capsicum annuum HOM05D008285 ORTHO05D010431 6.9e-24 113.2 61 93.4
CAN.G1324.6 Capsicum annuum HOM05D008285 ORTHO05D010431 1.2e-23 112.5 61 93.4
CAN.G657.10 Capsicum annuum HOM05D008285 ORTHO05D010431 2.7e-20 101.3 53 96.2
CAN.G213.15 Capsicum annuum HOM05D008285 ORTHO05D010431 5.7e-18 93.6 58 82.8
CAN.G262.5 Capsicum annuum HOM05D008285 ORTHO05D010431 1.4e-16 89.0 52 88.5
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 3.8e-14 80.9 56 75.0
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 5.0e-14 80.5 47 85.1
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 6.5e-14 80.1 55 74.5
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 6.5e-14 80.1 55 74.5
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 1.1e-13 79.3 53 75.5
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 1.1e-13 79.3 47 83.0
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.4e-13 79.0 47 80.9
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.4e-13 79.0 47 80.9
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 1.4e-13 79.0 47 80.9
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.9e-13 78.6 47 83.0
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.9e-13 78.6 47 83.0
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 2.5e-13 78.2 47 83.0
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 3.2e-13 77.8 47 80.9
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 4.2e-13 77.4 53 77.4
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 5.5e-13 77.0 53 73.6
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 5.5e-13 77.0 47 78.7
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 9.4e-13 76.3 47 78.7
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 1.2e-12 75.9 47 80.9
Aqoxy1G03262 Aquilegia oxysepala HOM05D008285 ORTHO05D010431 2.1e-12 75.1 59 64.4
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 2.7e-12 74.7 47 78.7
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 2.7e-12 74.7 47 78.7
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 3.6e-12 74.3 47 74.5
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 4.6e-12 73.9 48 81.2
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 4.6e-12 73.9 49 73.5
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 6.1e-12 73.6 56 71.4
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 6.1e-12 73.6 56 71.4
HanXRQCPg0580381 Helianthus annuus HOM05D008285 ORTHO05D010431 6.1e-12 73.6 54 72.2
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 1.0e-11 72.8 49 71.4
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 1.4e-11 72.4 47 76.6
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 1.8e-11 72.0 47 76.6
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 2.3e-11 71.6 47 78.7
Solyc03g013610.1 Solanum lycopersicum HOM05D008285 ORTHO05D010431 2.3e-11 71.6 56 69.6
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 3.0e-11 71.2 45 82.2
DCAR_032534 Daucus carota HOM05D008285 ORTHO05D010431 6.7e-11 70.1 55 70.9
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 3.3e-10 67.8 47 72.3
SGA_v2.0_scaffold36G14477 Striga asiatica HOM05D008285 ORTHO05D010431 5.7e-10 67.0 55 63.6
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 9.7e-10 66.2 44 75.0
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 1.3e-09 65.9 48 72.9
Potri.009G163200 Populus trichocarpa HOM05D008285 ORTHO05D010431 1.3e-09 65.9 47 72.3
BolC2t10592H Brassica oleracea HOM05D008285 ORTHO05D010431 2.2e-09 65.1 43 74.4
BolSC45t60913H Brassica oleracea HOM05D008285 ORTHO05D010431 1.4e-08 62.4 48 72.9
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 5.3e-08 60.5 46 67.4
SMO230G0005 Selaginella moellendorffii HOM05D008285 ORTHO05D010431 3.8e-06 54.3 53 50.9


User provided reference genes

Program Settings