Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 2.9e-39 164.9 88 100.0
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 2.9e-39 164.9 88 100.0
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 9.3e-38 159.8 88 96.6
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 1.2e-32 142.9 91 83.5
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 4.5e-32 141.0 91 83.5
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 9.9e-32 139.8 89 85.4
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 9.9e-32 139.8 91 84.6
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 1.7e-31 139.0 89 84.3
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 2.9e-31 138.3 88 81.8
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 2.9e-31 138.3 91 83.5
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 2.9e-31 138.3 136 63.2
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 4.9e-31 137.5 91 80.2
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 6.4e-31 137.1 91 82.4
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 6.4e-31 137.1 91 82.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 6.4e-31 137.1 91 82.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 6.4e-31 137.1 91 82.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 6.4e-31 137.1 91 82.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 6.4e-31 137.1 91 82.4
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 1.1e-30 136.3 89 82.0
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 1.9e-30 135.6 91 80.2
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 4.2e-30 134.4 91 79.1
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 5.5e-30 134.0 91 79.1
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 5.5e-30 134.0 91 79.1
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 7.1e-30 133.7 89 80.9
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 3.5e-29 131.3 84 82.1
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 4.6e-29 131.0 89 78.7
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 5.1e-28 127.5 88 76.1
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 8.7e-28 126.7 88 77.3
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 8.7e-28 126.7 92 73.9
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 3.3e-27 124.8 92 72.8
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.6e-27 124.0 77 80.5
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 7.4e-27 123.6 92 72.8
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 1.6e-26 122.5 92 73.9
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.8e-26 121.7 77 79.2
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-26 120.9 90 72.2
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-26 120.9 90 72.2
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-26 120.9 90 72.2
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-26 120.9 90 72.2
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-26 120.9 90 72.2
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 1.8e-25 119.0 92 70.7
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-25 119.0 88 72.7
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.4e-25 118.6 74 78.4
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 3.1e-25 118.2 92 70.7
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 9.0e-25 116.7 72 80.6
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 1.2e-24 116.3 73 78.1
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.6e-24 115.2 77 76.6
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 4.5e-24 114.4 82 74.4
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 5.8e-24 114.0 84 70.2
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.3e-23 112.8 77 75.3
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.3e-23 112.8 77 76.6
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 2.2e-23 112.1 58 100.0
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 2.9e-23 111.7 82 68.3
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.9e-23 110.9 79 75.9
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 8.4e-23 110.2 61 90.2
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 1.2e-21 106.3 61 88.5
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.6e-21 105.9 72 72.2
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-21 105.9 72 80.6
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.3e-20 102.8 73 75.3
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 3.9e-20 101.3 68 73.5
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 5.1e-20 100.9 74 71.6
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 6.7e-20 100.5 68 79.4
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 7.4e-19 97.1 62 75.8
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 9.7e-19 96.7 55 89.1
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 8.2e-18 93.6 68 72.1
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 3.1e-17 91.7 56 82.1
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 3.1e-17 91.7 68 70.6
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 6.9e-17 90.5 66 75.8
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 2.0e-16 89.0 67 74.6
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 1.9e-14 82.4 70 60.0
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 7.2e-14 80.5 56 73.2
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 3.9e-12 74.7 54 68.5
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 5.1e-12 74.3 45 75.6
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 6.3e-10 67.4 45 73.3
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 8.2e-10 67.0 55 69.1
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 2.0e-08 62.4 75 44.0
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 2.6e-08 62.0 75 56.0
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 7.7e-08 60.5 66 45.5
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 1.0e-07 60.1 67 46.3
Mapoly0065s0028 Marchantia polymorpha HOM05D003936 ORTHO05D004747 1.4e-06 56.2 67 40.3
Cc03_g11630 Coffea canephora HOM05D000533 ORTHO05D010350 2.5e-06 55.5 41 65.9


User provided reference genes

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