Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 5.2e-143 511.1 279 100.0
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.4e-119 433.3 286 80.1
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 2.9e-117 425.6 284 78.9
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 3.8e-117 425.2 282 79.8
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.3e-106 390.2 278 75.9
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 5.5e-100 368.2 289 68.5
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 9.3e-100 367.5 282 71.6
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 7.9e-99 364.4 284 68.3
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.8e-98 363.2 295 66.8
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 8.7e-98 360.9 321 64.2
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.5e-97 360.1 284 68.3
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 2.5e-97 359.4 279 68.8
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 3.3e-97 359.0 284 68.0
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.3e-97 359.0 286 67.1
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 3.3e-97 359.0 282 68.8
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 8.1e-96 354.4 291 64.9
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-95 354.0 295 63.7
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.4e-95 353.6 283 65.4
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 1.8e-95 353.2 289 64.7
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.8e-95 353.2 279 66.7
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.8e-95 353.2 292 68.8
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 3.1e-95 352.4 289 64.7
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.1e-95 352.4 224 79.5
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 3.1e-95 352.4 288 66.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 4.0e-95 352.1 295 63.4
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 5.3e-95 351.7 287 65.9
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 9.0e-95 350.9 284 65.8
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 9.0e-95 350.9 289 65.1
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 9.0e-95 350.9 282 66.3
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 9.0e-95 350.9 284 66.2
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.0e-94 349.7 293 65.2
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.4e-94 349.0 278 67.3
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.8e-94 348.2 279 65.9
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.0e-93 347.4 285 65.6
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.7e-93 346.7 285 65.3
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 3.8e-93 345.5 281 65.1
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.9e-93 345.1 283 64.3
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 8.4e-93 344.4 283 64.7
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.1e-92 344.0 282 65.2
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 5.5e-92 341.7 280 63.9
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 7.1e-92 341.3 304 62.8
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.6e-91 340.1 281 65.5
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.6e-91 340.1 281 65.5
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 3.5e-91 339.0 284 65.5
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.0e-90 337.4 288 62.5
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.3e-90 337.0 281 64.8
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.9e-90 335.5 205 83.4
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 6.7e-90 334.7 277 63.5
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 1.1e-89 334.0 282 64.9
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.5e-89 333.6 306 62.1
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 3.3e-89 332.4 289 64.4
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.3e-89 332.4 195 83.6
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 7.4e-89 331.3 283 63.3
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.6e-89 330.9 284 63.7
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 3.7e-88 328.9 279 63.4
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 8.2e-88 327.8 217 76.5
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.4e-87 327.0 319 57.1
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.8e-87 326.6 283 64.7
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.1e-87 325.9 345 56.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 3.1e-87 325.9 284 62.7
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.0e-85 320.9 288 61.5
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.3e-85 320.5 292 64.0
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.7e-85 320.1 220 71.8
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.7e-85 320.1 285 61.4
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 3.8e-85 318.9 195 80.0
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 8.5e-85 317.8 195 80.5
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.4e-84 317.0 282 61.0
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.9e-84 316.6 365 54.2
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 3.2e-84 315.8 285 60.4
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 4.6e-83 312.0 282 60.6
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 7.9e-83 311.2 282 60.3
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 3.3e-81 305.8 202 71.8
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.6e-80 303.5 288 59.4
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 3.1e-79 299.3 283 60.1
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.1e-79 299.3 304 56.9
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 9.1e-79 297.7 278 59.7
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.5e-78 297.0 285 57.2
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 4.5e-78 295.4 411 46.0
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.0e-77 294.3 150 95.3
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 2.9e-77 292.7 286 57.3
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.9e-76 290.0 198 74.2
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 2.5e-76 289.7 191 75.4
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 3.2e-76 289.3 285 56.5
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.2e-75 287.3 192 74.0
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.6e-75 287.0 204 70.6
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 6.7e-74 281.6 211 67.8
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.1e-73 280.8 281 57.3
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 2.0e-73 280.0 188 73.9
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 4.4e-73 278.9 191 72.8
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.7e-72 276.9 245 60.4
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.7e-72 276.9 208 68.3
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 3.7e-72 275.8 195 70.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 4.1e-71 272.3 221 64.3
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.2e-67 260.8 171 76.0
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.3e-65 252.7 239 61.1
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 6.3e-64 248.4 227 56.8
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.6e-59 233.8 228 57.0
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.3e-57 226.1 177 70.1
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 1.4e-55 220.7 156 73.7
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 5.3e-55 218.8 221 58.4
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.5e-52 210.7 131 79.4
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.5e-52 209.9 133 82.0
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.8e-47 193.7 214 53.3
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.3e-45 187.6 241 44.4
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.5e-44 183.3 207 52.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.8e-42 177.2 399 36.1
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.3e-42 176.8 113 76.1
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 1.4e-31 141.0 151 51.7
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 8.0e-27 125.2 80 72.5
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.2e-25 121.3 284 36.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 4.4e-25 119.4 224 40.2
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.2e-24 117.1 75 74.7
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.1e-23 114.8 96 63.5
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.6e-14 84.3 231 31.2
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.5e-12 77.8 121 41.3
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.3e-12 76.3 74 52.7
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.3e-08 64.7 61 59.0
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.6e-06 57.8 38 71.1
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 4.6e-06 56.2 37 67.6
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 7.8e-06 55.5 37 70.3


User provided reference genes

Program Settings