Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.4e-87 326.2 162 100.0
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.4e-47 192.6 140 71.4
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.4e-47 192.6 140 71.4
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 3.1e-47 192.2 140 70.7
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.4e-46 188.7 132 72.0
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.5e-46 188.3 132 72.7
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 5.0e-45 184.9 132 70.5
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-43 180.3 138 68.1
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.1e-43 179.5 138 65.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 3.0e-42 175.6 131 69.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 4.3e-41 171.8 131 65.6
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 2.8e-40 169.1 131 65.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.8e-40 169.1 131 61.8
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 3.7e-40 168.7 132 64.4
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 3.7e-40 168.7 131 64.9
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 4.8e-40 168.3 128 66.4
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 8.2e-40 167.5 131 65.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 8.2e-40 167.5 129 65.9
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.4e-39 166.8 131 61.8
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.4e-39 166.8 131 64.1
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.8e-39 166.4 128 65.6
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.8e-39 166.4 131 64.9
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.8e-39 166.4 131 64.9
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.4e-39 166.0 131 62.6
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 3.1e-39 165.6 133 65.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 4.1e-39 165.2 129 65.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.1e-39 165.2 131 62.6
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 5.3e-39 164.9 128 64.1
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 6.9e-39 164.5 131 62.6
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 9.1e-39 164.1 131 62.6
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 9.1e-39 164.1 128 63.3
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 9.1e-39 164.1 131 63.4
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.1e-39 164.1 131 62.6
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.5e-38 163.3 137 60.6
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.5e-38 163.3 131 62.6
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.0e-38 162.9 137 61.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.6e-38 162.5 132 63.6
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 3.4e-38 162.2 131 61.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 5.9e-38 161.4 131 61.1
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 7.7e-38 161.0 125 64.0
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.0e-37 160.6 131 61.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.3e-37 160.2 124 65.3
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.3e-37 160.2 127 61.4
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.7e-37 159.8 131 61.1
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.7e-37 159.8 138 61.6
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 2.2e-37 159.5 128 63.3
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 2.9e-37 159.1 128 62.5
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.9e-37 159.1 135 58.5
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 3.8e-37 158.7 128 63.3
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 5.0e-37 158.3 124 65.3
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 5.0e-37 158.3 128 61.7
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 6.5e-37 157.9 125 64.8
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 6.5e-37 157.9 128 60.9
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.1e-36 157.1 121 66.1
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.1e-36 157.1 129 59.7
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.1e-36 157.1 124 66.1
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.4e-36 156.8 137 57.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.4e-36 156.8 124 62.9
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.9e-36 156.4 134 59.7
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 1.9e-36 156.4 128 62.5
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.5e-36 156.0 125 61.6
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.5e-36 156.0 128 60.9
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.2e-36 155.6 139 56.1
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.2e-36 155.6 139 56.1
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 7.2e-36 154.5 125 64.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 7.2e-36 154.5 137 58.4
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 9.4e-36 154.1 135 57.0
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.2e-35 153.7 137 56.2
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.2e-35 153.7 124 62.1
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.6e-35 153.3 128 60.2
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.6e-35 153.3 128 60.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.6e-35 153.3 124 62.9
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.7e-35 152.5 135 56.3
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 2.7e-35 152.5 138 57.2
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.7e-35 152.5 131 58.0
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.6e-35 152.1 131 59.5
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.6e-35 152.1 135 56.3
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 4.7e-35 151.8 138 55.8
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 6.1e-35 151.4 135 56.3
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 6.1e-35 151.4 135 55.6
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 7.9e-35 151.0 135 56.3
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 7.9e-35 151.0 135 55.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 7.9e-35 151.0 135 55.6
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 7.9e-35 151.0 121 62.8
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.4e-34 150.2 131 60.3
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 3.0e-34 149.1 144 52.1
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 3.9e-34 148.7 135 54.8
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 3.9e-34 148.7 132 56.1
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.9e-34 148.7 124 62.1
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 5.1e-34 148.3 135 54.1
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.1e-34 148.3 135 54.8
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 6.7e-34 147.9 131 55.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.1e-33 147.1 137 55.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.1e-33 147.1 135 57.0
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.0e-33 146.4 135 53.3
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.6e-33 146.0 124 61.3
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.6e-33 146.0 124 61.3
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 3.3e-33 145.6 135 53.3
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 5.7e-33 144.8 135 54.8
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 5.7e-33 144.8 131 55.0
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 9.7e-33 144.1 135 53.3
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.2e-32 142.9 130 53.8
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 4.8e-32 141.7 135 52.6
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 8.2e-32 141.0 122 61.5
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 5.3e-31 138.3 119 61.3
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 5.3e-31 138.3 124 58.1
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 7.0e-31 137.9 129 51.9
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.0e-30 136.3 130 53.1
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.0e-30 136.3 129 55.8
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 5.9e-30 134.8 90 68.9
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.9e-29 132.5 144 49.3
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.5e-29 131.3 99 65.7
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.1e-28 130.6 137 49.6
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.5e-28 130.2 132 52.3
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 3.6e-27 125.6 125 51.2
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 3.6e-27 125.6 129 50.4
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 5.2e-26 121.7 127 48.0
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 6.7e-26 121.3 105 60.0
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 2.6e-25 119.4 99 60.6
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.6e-25 119.4 128 49.2
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 5.7e-25 118.2 88 65.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 6.3e-24 114.8 94 59.6
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 4.1e-23 112.1 131 45.8
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 7.0e-23 111.3 93 60.2
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.0e-21 107.5 125 45.6
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 3.8e-21 105.5 101 50.5
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.5e-17 93.6 70 58.6
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.3e-16 90.5 76 56.6
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.7e-14 82.8 104 45.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.5e-12 77.0 77 50.6
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 2.5e-12 76.3 43 83.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.2e-12 74.7 53 64.2


User provided reference genes

Program Settings