Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 5.2e-204 714.1 355 100.0
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.3e-183 646.4 356 90.4
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 4.2e-182 641.3 356 89.0
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 5.2e-180 634.4 356 87.9
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 6.8e-164 580.9 349 83.1
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.9e-161 572.8 356 81.2
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.0e-159 567.0 355 77.7
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.1e-157 559.3 357 76.2
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 4.0e-156 555.1 355 75.8
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.2e-155 553.5 357 75.9
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 3.4e-155 552.0 358 74.6
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 4.9e-154 548.1 355 74.4
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.2e-153 545.4 356 74.2
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.1e-152 542.7 355 72.7
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 2.7e-152 542.3 355 75.2
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 4.6e-152 541.6 365 72.6
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 3.9e-151 538.5 355 73.2
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 5.1e-151 538.1 355 74.1
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 6.6e-151 537.7 358 73.5
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.1e-150 537.0 355 73.8
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.1e-150 537.0 363 72.5
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.1e-150 537.0 355 73.2
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.9e-150 536.2 355 70.1
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.9e-150 536.2 361 73.7
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.9e-150 536.2 355 74.1
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.5e-150 535.8 355 72.1
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 5.6e-150 534.6 356 72.8
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 2.1e-149 532.7 358 71.5
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.1e-149 532.7 358 71.5
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.6e-149 531.9 355 73.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 4.7e-149 531.6 362 71.5
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.2e-149 531.2 358 71.2
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.2e-149 531.2 358 71.2
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 6.2e-149 531.2 355 73.0
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 8.1e-149 530.8 362 71.0
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.1e-148 530.4 362 70.7
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.1e-148 530.4 362 70.4
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.4e-148 530.0 357 72.0
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 4.0e-148 528.5 356 71.6
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 4.0e-148 528.5 355 72.4
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 5.2e-148 528.1 355 72.4
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 5.2e-148 528.1 356 71.1
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 5.2e-148 528.1 357 71.7
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 8.9e-148 527.3 355 71.3
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.2e-147 526.9 362 71.0
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 1.2e-147 526.9 355 72.1
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.5e-147 526.6 355 71.5
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 2.6e-147 525.8 355 71.5
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.6e-147 525.8 355 71.8
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 4.4e-147 525.0 361 70.1
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 4.4e-147 525.0 356 71.3
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 5.8e-147 524.6 355 70.1
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 5.8e-147 524.6 357 71.1
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 71.3
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 73.8
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.7e-146 523.1 355 70.4
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 2.9e-146 522.3 355 71.8
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 3.8e-146 521.9 361 68.4
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 4.9e-146 521.5 355 71.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 4.9e-146 521.5 359 70.2
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.4e-146 520.8 355 70.4
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.4e-146 520.8 356 70.2
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 1.1e-145 520.4 355 69.9
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.4e-145 520.0 356 71.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.4e-145 520.0 355 71.3
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 2.4e-145 519.2 355 70.4
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 5.4e-145 518.1 357 70.0
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 7.1e-145 517.7 358 70.1
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 9.2e-145 517.3 355 70.4
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.6e-144 516.5 361 67.3
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 2.1e-144 516.2 355 70.7
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.8e-144 514.2 355 69.9
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 7.8e-144 514.2 350 71.1
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.0e-143 513.8 355 69.3
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.3e-143 513.5 356 69.9
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.7e-143 513.1 355 69.6
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.7e-143 513.1 355 67.9
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.3e-143 512.7 360 69.2
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 3.0e-143 512.3 361 67.6
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 3.0e-143 512.3 355 67.9
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.9e-143 511.9 355 68.5
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 6.6e-143 511.1 356 69.1
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 8.7e-143 510.8 359 71.0
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 8.7e-143 510.8 366 68.6
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.1e-142 510.4 355 68.5
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-142 510.4 355 69.3
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.1e-142 510.4 355 69.0
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.1e-142 510.4 355 68.7
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 3.3e-142 508.8 357 68.9
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 9.6e-142 507.3 356 69.9
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.6e-141 506.5 356 68.3
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.1e-141 506.1 355 69.6
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.6e-141 505.4 355 69.3
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 6.2e-141 504.6 362 67.4
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 8.1e-141 504.2 361 66.8
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 8.1e-141 504.2 399 63.7
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.1e-140 503.8 359 68.8
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.4e-140 503.4 355 68.5
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 2.4e-140 502.7 357 68.9
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 3.1e-140 502.3 364 66.8
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 9.0e-140 500.7 355 67.3
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.2e-139 500.4 357 68.3
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.2e-139 500.4 357 67.2
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 4.9e-138 495.0 356 67.7
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 6.4e-138 494.6 355 67.0
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.9e-137 493.0 355 66.8
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.2e-137 492.3 355 66.2
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.2e-137 492.3 355 66.2
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 4.2e-137 491.9 361 66.2
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 7.1e-137 491.1 355 67.0
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 4.6e-136 488.4 361 65.7
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 6.0e-136 488.0 359 67.1
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 7.8e-136 487.6 359 67.4
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 3.3e-134 482.3 355 67.6
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.1e-133 479.6 356 65.2
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 8.1e-133 477.6 355 66.2
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 1.1e-132 477.2 336 67.6
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.4e-132 476.1 342 66.7
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 3.1e-132 475.7 356 66.3
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 4.0e-132 475.3 360 65.0
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 3.4e-131 472.2 366 61.7
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 1.1e-129 467.2 357 64.1
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 1.9e-129 466.5 355 64.5
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 4.2e-129 465.3 364 61.8
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 9.6e-126 454.1 358 62.6
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 2.1e-125 453.0 356 65.2
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 4.0e-124 448.7 361 61.5
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.4e-123 445.7 361 59.8
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 6.4e-122 441.4 356 61.8
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.0e-115 419.9 307 67.4
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.3e-114 417.2 292 70.9
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 5.9e-107 391.7 301 63.8
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 6.5e-106 388.3 357 58.3
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.0e-103 380.9 279 71.3
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.3e-101 374.0 355 54.6
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.3e-101 371.7 328 57.9
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.0e-99 366.7 302 59.6
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.3e-77 291.6 215 70.7
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 7.2e-73 278.5 356 43.8
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 2.0e-70 270.4 249 61.4
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.8e-69 265.8 273 49.5
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 3.5e-67 259.6 353 42.2
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.5e-62 241.9 157 68.8
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.8e-59 231.9 175 68.6
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 1.2e-56 224.6 357 36.7
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.6e-56 224.2 115 89.6
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.4e-54 216.5 147 70.1
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.7e-53 214.2 126 79.4
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.4e-36 157.1 192 45.8
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 4.3e-33 146.4 134 58.2
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-31 141.7 85 68.2
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-31 140.6 85 68.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.2e-31 139.4 85 67.1
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.2e-29 134.0 85 65.9
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 4.9e-29 132.9 188 41.5
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.4e-28 129.4 106 62.3
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 7.1e-28 129.0 139 46.0
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-23 115.2 62 88.7
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 5.3e-23 112.8 191 40.8
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 4.9e-21 106.3 59 81.4
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 4.9e-21 106.3 63 76.2
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 4.9e-21 106.3 59 81.4
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 1.6e-19 101.3 99 64.6
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 6.0e-19 99.4 60 75.0
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.3e-18 98.2 76 64.5
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 4.3e-17 93.2 55 76.4
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.8e-16 90.5 150 36.7
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 8.1e-16 89.0 84 59.5
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.8e-15 87.8 150 32.0
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 4.0e-15 86.7 73 54.8
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-15 86.3 59 61.0
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.5e-14 84.7 76 52.6
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.4e-14 83.6 81 55.6
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 4.5e-14 83.2 49 75.5
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-13 80.5 39 76.9
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.0e-10 72.0 87 48.3
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 5.1e-10 69.7 173 30.6
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 6.7e-10 69.3 230 27.4
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 5.6e-09 66.2 50 56.0
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 9.6e-09 65.5 65 44.6
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 6.2e-08 62.8 207 26.1
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 7.6e-06 55.8 115 38.3


User provided reference genes

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