Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G959.7 Capsicum annuum HOM05D005970 ORTHO05D007146 7.9e-160 567.0 274 100.0
CAN.G710.55 Capsicum annuum HOM05D005970 ORTHO05D007146 2.2e-77 293.1 191 77.0
Solyc09g098450.4 Solanum lycopersicum HOM05D005970 ORTHO05D007146 6.4e-77 291.6 191 76.4
Sopen09g036380 Solanum pennellii HOM05D005970 ORTHO05D007146 6.4e-77 291.6 191 76.4
Nitab4.5_0002313g0060 Nicotiana tabacum HOM05D005970 ORTHO05D007146 5.4e-76 288.5 191 75.4
Nitab4.5_0001049g0010 Nicotiana tabacum HOM05D005970 ORTHO05D007146 6.0e-75 285.0 191 74.9
Peaxi162Scf00286g00235 Petunia axillaris HOM05D005970 ORTHO05D007146 7.8e-75 284.6 191 75.4
CSS0014236 Camellia sinensis var. sinensis HOM05D005970 ORTHO05D007146 1.7e-61 240.4 189 61.9
Actinidia32934 Actinidia chinensis HOM05D005970 ORTHO05D007146 1.1e-60 237.7 211 55.5
Hma1.2p1_1477F.1_g285890 Hydrangea macrophylla HOM05D005970 ORTHO05D007146 9.2e-60 234.6 190 61.1
Dinv22666 Davidia involucrata HOM05D005970 ORTHO05D007146 2.3e-58 229.9 189 60.3
Eucgr.A00211 Eucalyptus grandis HOM05D005970 ORTHO05D007146 5.1e-58 228.8 190 59.5
Lj3A262T16 Lonicera japonica HOM05D005970 ORTHO05D007146 1.9e-57 226.9 200 57.0
vmacro00562 Vaccinium macrocarpon HOM05D005970 ORTHO05D007146 9.6e-57 224.6 219 54.8
Rhsim09G0037500 Rhododendron simsii HOM05D005970 ORTHO05D007146 1.2e-56 224.2 240 47.5
Nn1g09815 Nelumbo nucifera HOM05D005970 ORTHO05D007146 4.0e-55 219.2 187 58.3
TAR362G0058 Trochodendron aralioides HOM05D005970 ORTHO05D007146 4.0e-55 219.2 187 56.1
Aqoxy2G04048 Aquilegia oxysepala HOM05D005970 ORTHO05D007146 6.9e-55 218.4 188 55.9
GSVIVG01013548001 Vitis vinifera HOM05D005970 ORTHO05D007146 9.0e-55 218.0 186 56.5
QL10p046561 Quercus lobata HOM05D005970 ORTHO05D007146 4.4e-54 215.7 190 56.3
Lsat_1_v5_gn_4_37800 Lactuca sativa HOM05D005970 ORTHO05D007146 7.6e-54 214.9 192 55.7
MD04G1032500 Malus domestica HOM05D005970 ORTHO05D007146 2.2e-53 213.4 204 52.9
arahy.Tifrunner.gnm1.ann1.ILR90A Arachis hypogaea HOM05D005970 ORTHO05D007146 2.9e-53 213.0 236 46.6
arahy.Tifrunner.gnm1.ann1.R0ZLJW Arachis hypogaea HOM05D005970 ORTHO05D007146 6.4e-53 211.8 236 46.6
CsaV3_6G003170 Cucumis sativus L. HOM05D005970 ORTHO05D007146 1.4e-52 210.7 202 52.5
Duzib151G0884 Durio zibethinus HOM05D005970 ORTHO05D007146 1.4e-52 210.7 205 50.2
Os04g0489100 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 1.4e-52 210.7 182 57.1
MBI08_g17320_MAGBIO Magnolia biondii HOM05D005970 ORTHO05D007146 2.4e-52 209.9 240 45.4
PGR083G2204 Punica granatum HOM05D005970 ORTHO05D007146 7.1e-52 208.4 244 45.9
COL.COLO4_24350 Corchorus olitorius HOM05D005970 ORTHO05D007146 9.3e-52 208.0 229 46.7
ECA234G4469 Erigeron canadensis HOM05D005970 ORTHO05D007146 9.3e-52 208.0 192 53.6
CANSAT80G1971 Cannabis sativa HOM05D005970 ORTHO05D007146 1.2e-51 207.6 269 43.5
MELO3C011504.2 Cucumis melo HOM05D005970 ORTHO05D007146 1.2e-51 207.6 200 51.5
Psat6g242520 Pisum sativum HOM05D005970 ORTHO05D007146 1.2e-51 207.6 239 45.2
HPP92_002722 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.2e-51 207.6 273 44.7
Zm00001eb425400 Zea mays HOM05D005970 ORTHO05D007146 1.2e-51 207.6 182 57.7
Ah.12g062330 Amaranthus hybridus HOM05D005970 ORTHO05D007146 1.6e-51 207.2 189 53.4
ATR0618G312 Amborella trichopoda HOM05D005970 ORTHO05D007146 1.6e-51 207.2 185 55.1
Medtr1g116780 Medicago truncatula HOM05D005970 ORTHO05D007146 1.6e-51 207.2 185 55.1
HPP92_001263 Vanilla planifolia HOM05D005970 ORTHO05D007146 2.7e-51 206.5 207 51.2
Ciclev10023314m.g Citrus clementina HOM05D005970 ORTHO05D007146 4.6e-51 205.7 190 52.6
Lj5g0014069 Lotus japonicus HOM05D005970 ORTHO05D007146 4.6e-51 205.7 204 51.5
Ca_11416_v3 Cicer arietinum L. HOM05D005970 ORTHO05D007146 6.0e-51 205.3 244 45.5
THA.LOC104800916 Tarenaya hassleriana HOM05D005970 ORTHO05D007146 6.0e-51 205.3 190 51.6
HanXRQChr17g0557031 Helianthus annuus HOM05D005970 ORTHO05D007146 1.0e-50 204.5 190 53.2
HPP92_001247 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.3e-50 204.1 183 55.2
AUR62042870 Chenopodium quinoa HOM05D005970 ORTHO05D007146 2.3e-50 203.4 189 54.0
Atru.chr3.1658_Atru.chr3.1659 Acer truncatum HOM05D005970 ORTHO05D007146 3.0e-50 203.0 190 48.4
Sc22g0002260 Simmondsia chinensis HOM05D005970 ORTHO05D007146 3.9e-50 202.6 188 52.7
Glyma.20G248000 Glycine max HOM05D005970 ORTHO05D007146 5.1e-50 202.2 185 51.9
Prupe.1G181900 Prunus persica HOM05D005970 ORTHO05D007146 8.7e-50 201.4 188 52.7
RcHm_v2.0_Chr4g0408981 Rosa chinensis HOM05D005970 ORTHO05D007146 1.1e-49 201.1 188 52.1
FvH4_4g11690 Fragaria vesca HOM05D005970 ORTHO05D007146 1.5e-49 200.7 188 52.1
AT1G05790 Arabidopsis thaliana HOM05D005970 ORTHO05D007146 5.6e-49 198.7 183 52.5
Carub.0001s0513 Capsella rubella HOM05D005970 ORTHO05D007146 5.6e-49 198.7 184 51.6
BolC8t47015H Brassica oleracea HOM05D005970 ORTHO05D007146 7.3e-49 198.4 183 53.0
BraA10t42716Z Brassica rapa HOM05D005970 ORTHO05D007146 7.3e-49 198.4 191 49.7
C05p04110 Brassica napus HOM05D005970 ORTHO05D007146 9.6e-49 198.0 210 46.7
C08p02230 Brassica napus HOM05D005970 ORTHO05D007146 9.6e-49 198.0 183 53.0
AL1G15700 Arabidopsis lyrata HOM05D005970 ORTHO05D007146 1.3e-48 197.6 183 51.9
A08p36290 Brassica napus HOM05D005970 ORTHO05D007146 1.3e-48 197.6 183 51.9
BraA08t35533Z Brassica rapa HOM05D005970 ORTHO05D007146 1.3e-48 197.6 183 51.9
Thhalv10006938m.g Eutrema salsugineum HOM05D005970 ORTHO05D007146 2.1e-48 196.8 183 51.9
Potri.014G150800 Populus trichocarpa HOM05D005970 ORTHO05D007146 2.1e-48 196.8 274 43.1
Sp1g04590 Schrenkiella parvula HOM05D005970 ORTHO05D007146 2.1e-48 196.8 183 51.9
Aa31LG1G8570 Aethionema arabicum HOM05D005970 ORTHO05D007146 2.8e-48 196.4 183 52.5
A10p04500 Brassica napus HOM05D005970 ORTHO05D007146 2.8e-48 196.4 183 51.4
TPR.G8892 Trifolium pratense HOM05D005970 ORTHO05D007146 4.8e-48 195.7 241 44.4
Cpa.g.sc164.4 Carica papaya HOM05D005970 ORTHO05D007146 6.2e-48 195.3 165 58.2
FAN12G0387 Fragaria x ananassa HOM05D005970 ORTHO05D007146 8.1e-48 194.9 188 51.6
VMungo0720G0532 Vigna mungo HOM05D005970 ORTHO05D007146 1.8e-47 193.7 178 52.2
Lalb_Chr06g0164591 Lupinus albus HOM05D005970 ORTHO05D007146 3.1e-47 193.0 256 41.4
Gohir.A02G013401 Gossypium hirsutum HOM05D005970 ORTHO05D007146 5.3e-47 192.2 183 49.7
Sabra14G0114200 Salix brachista HOM05D005970 ORTHO05D007146 5.3e-47 192.2 204 50.5
Sed0012260 Sechium edule HOM05D005970 ORTHO05D007146 6.9e-47 191.8 169 56.2
Thecc.04G181600 Theobroma cacao HOM05D005970 ORTHO05D007146 6.9e-47 191.8 171 56.1
CiPaw.01G106400 Carya illinoinensis HOM05D005970 ORTHO05D007146 9.0e-47 191.4 174 55.7
Gorai.005G017800 Gossypium raimondii HOM05D005970 ORTHO05D007146 9.0e-47 191.4 183 49.7
FAN12G1273 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.6e-46 189.9 165 56.4
Gohir.D02G014300 Gossypium hirsutum HOM05D005970 ORTHO05D007146 1.3e-45 187.6 178 50.6
FAN07G1016 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.2e-45 186.8 165 55.8
BolC5t29189H Brassica oleracea HOM05D005970 ORTHO05D007146 3.8e-45 186.0 183 49.7
Mapoly0123s0015 Marchantia polymorpha HOM05D005970 ORTHO05D007146 1.2e-38 164.5 241 39.4
Cc00_g08710 Coffea canephora HOM05D005970 ORTHO05D007146 1.5e-38 164.1 147 56.5
SMO337G0034 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 6.4e-37 158.7 213 41.3
SMO336G0028 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 1.4e-36 157.5 213 42.3
SMO337G0042 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 7.1e-36 155.2 165 48.5
DCAR_028456 Daucus carota HOM05D005970 ORTHO05D007146 1.8e-34 150.6 98 67.3
AagrBONN_evm.TU.Sc2ySwM_368.857 Anthoceros agrestis HOM05D005970 ORTHO05D007146 3.9e-34 149.4 165 48.5
CBR_g2768 Chara braunii HOM05D005970 ORTHO05D007146 5.1e-34 149.1 184 45.1
Potri.002G231501 Populus trichocarpa HOM05D005970 ORTHO05D007146 6.7e-34 148.7 104 66.3
AagrBONN_evm.TU.Sc2ySwM_368.849 Anthoceros agrestis HOM05D005970 ORTHO05D007146 1.9e-33 147.1 165 47.9
Sabra02G0176700 Salix brachista HOM05D005970 ORTHO05D007146 1.6e-32 144.1 189 41.8
Peaxi162Scf00286g00234 Petunia axillaris HOM05D005970 ORTHO05D007146 1.9e-28 130.6 73 83.6
Pp3c5_12210 Physcomitrium patens HOM05D005970 ORTHO05D007146 7.9e-27 125.2 214 33.6
CDE09G0649 Ceratophyllum demersum HOM05D005970 ORTHO05D007146 3.3e-25 119.8 184 36.4
Pp3c6_14360 Physcomitrium patens HOM05D005970 ORTHO05D007146 3.7e-24 116.3 162 40.7
Haze_11055 Corylus avellana HOM05D005970 ORTHO05D007146 6.3e-24 115.5 134 52.2
ClCG08G003970 Citrullus lanatus HOM05D005970 ORTHO05D007146 7.9e-11 72.0 50 60.0
Phvul.007G002300 Phaseolus vulgaris HOM05D005970 ORTHO05D007146 2.3e-10 70.5 50 62.0
ClCG08G003980 Citrullus lanatus HOM05D005970 ORTHO05D007146 7.7e-06 55.5 39 71.8


User provided reference genes

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