Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 5.4e-56 221.1 140 100.0
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 7.8e-39 164.1 143 78.3
Solyc10g077090.2 Solanum lycopersicum HOM05D005060 ORTHO05D005975 7.3e-37 157.5 143 76.9
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.6e-31 139.8 114 84.2
Nitab4.5_0001270g0130 Nicotiana tabacum HOM05D005060 ORTHO05D005975 6.2e-28 127.9 111 82.9
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 7.1e-24 114.4 144 59.7
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 3.5e-23 112.1 144 63.2
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 3.9e-22 108.6 152 60.5
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 1.9e-21 106.3 150 54.0
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.9e-21 106.3 150 54.7
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 5.6e-21 104.8 150 53.3
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 2.1e-20 102.8 141 45.4
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 1.8e-19 99.8 145 51.0
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 3.4e-18 95.5 150 60.0
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 8.4e-17 90.9 150 54.0
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 1.1e-16 90.5 140 59.3
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 1.6e-15 86.7 149 45.0
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 1.3e-14 83.6 144 53.5
Nitab4.5_0002042g0050 Nicotiana tabacum HOM05D005060 ORTHO05D005975 3.0e-14 82.4 58 69.0
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 1.5e-13 80.1 119 59.7
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 9.6e-13 77.4 119 58.8
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 9.6e-13 77.4 149 53.7
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.6e-12 76.6 93 72.0
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.6e-12 76.6 93 72.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 1.4e-11 73.6 153 45.8
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 1.8e-11 73.2 120 59.2
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 4.1e-11 72.0 146 52.1
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 4.1e-11 72.0 150 34.7
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 7.6e-10 67.8 118 55.1
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 7.6e-10 67.8 151 45.0
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 1.7e-09 66.6 133 40.6
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 6.5e-09 64.7 117 43.6
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 8.5e-09 64.3 147 35.4
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 1.4e-08 63.5 94 64.9
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 1.4e-08 63.5 115 41.7
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 1.9e-08 63.2 143 32.9
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 2.5e-08 62.8 150 46.0
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 3.2e-08 62.4 120 38.3
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 5.5e-08 61.6 139 48.9
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 1.2e-07 60.5 118 33.9
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 1.6e-07 60.1 128 35.9
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 1.6e-07 60.1 144 47.2
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 1.6e-07 60.1 123 39.8
CDE04G0407 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 2.1e-07 59.7 66 84.8
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 2.1e-07 59.7 150 38.0
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 2.7e-07 59.3 151 51.7
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 2.7e-07 59.3 141 34.0
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 3.6e-07 58.9 147 50.3
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 3.6e-07 58.9 151 31.8
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 4.6e-07 58.5 116 41.4
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 6.1e-07 58.2 146 43.8
Peaxi162Scf00003g00535 Petunia axillaris HOM05D005060 ORTHO05D049430 6.1e-07 58.2 70 47.1
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 7.9e-07 57.8 115 53.0
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 7.9e-07 57.8 146 41.1
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 7.9e-07 57.8 148 33.1
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 7.9e-07 57.8 122 46.7
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 7.9e-07 57.8 148 38.5
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 1.0e-06 57.4 120 31.7
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.0e-06 57.4 125 36.0
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 1.3e-06 57.0 118 44.1
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 1.3e-06 57.0 148 46.6
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.3e-06 57.0 120 38.3
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 2.3e-06 56.2 140 40.0
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 2.3e-06 56.2 152 32.2
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 2.3e-06 56.2 150 35.3
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 3.0e-06 55.8 154 34.4
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 3.0e-06 55.8 145 37.2
CiPaw.09G163900 Carya illinoinensis HOM05D005060 ORTHO05D005975 3.9e-06 55.5 106 32.1
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 3.9e-06 55.5 146 37.0
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 3.9e-06 55.5 121 47.9
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 5.1e-06 55.1 143 48.3
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 6.7e-06 54.7 113 52.2
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 6.7e-06 54.7 143 35.0
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 6.7e-06 54.7 141 30.5
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 8.7e-06 54.3 121 40.5
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 8.7e-06 54.3 146 47.3
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 8.7e-06 54.3 113 37.2


User provided reference genes

Program Settings