Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G958.3 Capsicum annuum HOM05D009034 ORTHO05D009362 5.3e-223 777.3 379 100.0
CAN.G696.2 Capsicum annuum HOM05D009034 ORTHO05D009362 2.6e-214 748.4 379 96.0
PGSC0003DMG400044507 Solanum tuberosum HOM05D009034 ORTHO05D009362 3.2e-127 459.1 369 64.8
PGSC0003DMG400036040 Solanum tuberosum HOM05D009034 ORTHO05D009362 9.1e-90 334.7 277 65.7
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.3e-77 293.5 362 51.7
Peaxi162Scf00016g00626 Petunia axillaris HOM05D009034 ORTHO05D009362 2.1e-62 243.8 412 39.8
Sopen01g052330 Solanum pennellii HOM05D009034 ORTHO05D009362 6.8e-61 238.8 359 43.5
PGSC0003DMG400036424 Solanum tuberosum HOM05D009034 ORTHO05D009362 8.9e-61 238.4 360 44.7
Nitab4.5_0009524g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.7e-59 234.2 371 41.8
Sopen01g051920 Solanum pennellii HOM05D009034 ORTHO05D009362 1.7e-59 234.2 349 44.4
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.7e-56 224.2 340 42.1
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 1.5e-52 211.1 269 49.1
Nitab4.5_0003526g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.9e-51 206.1 339 42.5
Peaxi162Scf00016g00054 Petunia axillaris HOM05D009034 ORTHO05D009362 2.4e-50 203.8 364 41.5
Solyc01g109730.1 Solanum lycopersicum HOM05D009034 ORTHO05D009362 2.5e-47 193.7 291 45.4
CAN.G1058.2 Capsicum annuum HOM05D009034 ORTHO05D009362 1.2e-46 191.4 344 37.8
Nitab4.5_0009799g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.2e-46 191.4 284 43.3
PGSC0003DMG400044125 Solanum tuberosum HOM05D009034 ORTHO05D009362 2.8e-46 190.3 354 39.5
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 3.6e-46 189.9 253 44.3
Nitab4.5_0006159g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 7.3e-39 165.6 290 41.7
Nitab4.5_0000783g0030 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.4e-34 151.4 268 39.9
Nitab4.5_0004390g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.5e-31 141.4 212 45.3
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.7e-30 136.3 143 53.1
Nitab4.5_0002662g0080 Nicotiana tabacum HOM05D009034 ORTHO05D009362 9.9e-28 128.6 196 42.3
Nitab4.5_0003603g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.3e-27 128.3 170 45.3
Nitab4.5_0009972g0050 Nicotiana tabacum HOM05D009034 ORTHO05D009362 8.4e-27 125.6 124 50.8
Peaxi162Scf00016g00068 Petunia axillaris HOM05D009034 ORTHO05D009362 1.9e-26 124.4 124 56.5
Nitab4.5_0000283g0190 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.2e-25 121.7 123 57.7
Peaxi162Scf01164g00412 Petunia axillaris HOM05D009034 ORTHO05D009362 1.1e-21 108.6 301 31.6
PGSC0003DMG400024922 Solanum tuberosum HOM05D000257 ORTHO05D004041 6.9e-21 105.9 192 37.0
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 7.6e-20 102.4 301 30.2
Nitab4.5_0003526g0040 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.2e-19 100.9 153 43.1
Sopen03g020740 Solanum pennellii HOM05D000004 ORTHO05D009362 2.9e-19 100.5 142 44.4
Nitab4.5_0000283g0270 Nicotiana tabacum HOM05D009034 ORTHO05D009362 1.6e-17 94.7 75 65.3
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 2.7e-17 94.0 344 25.0
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 1.7e-16 91.3 288 26.7
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 8.7e-16 89.0 336 26.2
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 3.3e-15 87.0 293 26.6
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 3.6e-14 83.6 314 25.2
Nitab4.5_0002096g0090 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.2e-14 82.8 77 59.7
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 8.1e-14 82.4 331 27.2
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 1.1e-13 82.0 332 25.9
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 1.1e-13 82.0 319 24.5
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 1.4e-13 81.6 332 25.9
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 1.4e-13 81.6 298 26.2
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 4.0e-13 80.1 305 24.3
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 6.9e-13 79.3 309 25.9
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 9.9e-12 75.5 295 23.7
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 1.3e-11 75.1 310 27.1
PGSC0003DMG402024921 Solanum tuberosum HOM05D009034 ORTHO05D009362 1.3e-11 75.1 133 37.6
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 2.9e-11 73.9 301 25.9
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 2.4e-10 70.9 339 21.5
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 2.4e-10 70.9 292 22.3
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 3.2e-10 70.5 312 26.6
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 3.2e-10 70.5 290 27.9
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 7.1e-10 69.3 328 22.6
Prupe.4G220100 Prunus persica HOM05D008179 ORTHO05D009362 2.7e-09 67.4 314 24.5
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 4.6e-09 66.6 306 26.1
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 1.8e-08 64.7 357 23.2
RcHm_v2.0_Chr3g0479021 Rosa chinensis HOM05D008179 ORTHO05D009362 1.8e-08 64.7 365 20.8
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 8.7e-08 62.4 185 27.6
FAN14G0841 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.5e-07 61.6 288 24.7
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 1.9e-07 61.2 297 26.3
FvH4_6g21740 Fragaria vesca HOM05D008179 ORTHO05D009362 1.3e-06 58.5 288 24.3
RcHm_v2.0_Chr5g0004511 Rosa chinensis HOM05D008179 ORTHO05D009362 1.3e-06 58.5 322 23.0
Ca_22782_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.1e-06 57.8 71 46.5
Medtr7g056170 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-06 57.8 47 59.6
Dinv17850 Davidia involucrata HOM05D008179 ORTHO05D009362 3.7e-06 57.0 129 30.2
Peaxi162Scf00205g01428 Petunia axillaris HOM05D012079 ORTHO05D011565 3.7e-06 57.0 75 40.0
Nitab4.5_0001428g0160 Nicotiana tabacum HOM05D009034 ORTHO05D009362 4.8e-06 56.6 48 52.1
Psat3g149480 Pisum sativum HOM05D000007 ORTHO05D000017 6.2e-06 56.2 74 40.5


User provided reference genes

Program Settings