Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G95.16 Capsicum annuum HOM05D000011 ORTHO05D016876 8.8e-188 660.2 353 100.0
CAN.G1310.7 Capsicum annuum HOM05D000011 ORTHO05D115643 6.0e-128 461.5 468 59.4
CAN.G58.49 Capsicum annuum HOM05D000011 ORTHO05D007164 1.1e-65 254.6 230 61.3
CAN.G57.21 Capsicum annuum HOM05D000011 ORTHO05D024769 6.7e-63 245.4 289 50.5
CAN.G681.35 Capsicum annuum HOM05D000011 ORTHO05D007164 6.3e-61 238.8 522 35.2
CAN.G294.23 Capsicum annuum HOM05D000005 ORTHO05D007164 3.2e-57 226.5 222 59.0
CAN.G713.16 Capsicum annuum HOM05D000011 ORTHO05D016876 6.8e-55 218.8 149 75.2
CAN.G681.45 Capsicum annuum HOM05D000011 ORTHO05D007164 4.8e-53 212.6 579 31.4
CAN.G713.17 Capsicum annuum HOM05D000011 ORTHO05D024769 7.2e-49 198.7 245 55.1
PGSC0003DMG400038440 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.1e-44 184.9 392 35.5
CAN.G140.33 Capsicum annuum HOM05D000011 ORTHO05D115489 1.2e-40 171.4 218 51.4
CAN.G706.27 Capsicum annuum HOM05D000011 ORTHO05D007164 8.9e-39 165.2 100 80.0
PGSC0003DMG400031185 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.9e-37 160.2 427 31.9
Nitab4.5_0000309g0100 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.1e-36 158.3 121 66.1
CAN.G681.36 Capsicum annuum HOM05D000011 ORTHO05D007164 2.4e-36 157.1 120 65.8
CAN.G681.34 Capsicum annuum HOM05D000011 ORTHO05D007164 3.2e-36 156.8 130 66.2
CAN.G681.47 Capsicum annuum HOM05D000011 ORTHO05D007164 3.2e-36 156.8 524 29.2
Nitab4.5_0008390g0030 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.0e-35 154.1 121 65.3
CAN.G375.80 Capsicum annuum HOM05D000011 ORTHO05D007164 4.6e-35 152.9 138 60.1
Nitab4.5_0002781g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 6.0e-35 152.5 121 66.1
PGSC0003DMG400006573 Solanum tuberosum HOM05D000011 ORTHO05D007164 5.0e-34 149.4 121 63.6
CAN.G681.38 Capsicum annuum HOM05D000011 ORTHO05D016876 8.6e-34 148.7 129 63.6
PGSC0003DMG400016601 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.2e-32 144.8 121 62.0
PGSC0003DMG401016602 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.2e-32 144.8 135 58.5
PGSC0003DMG402016602 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.2e-32 144.8 135 58.5
Nitab4.5_0000309g0150 Nicotiana tabacum HOM05D000011 ORTHO05D007164 3.6e-32 143.3 120 64.2
CAN.G48.3 Capsicum annuum HOM05D000011 ORTHO05D007164 4.7e-32 142.9 264 36.7
CAN.G48.2 Capsicum annuum HOM05D000011 ORTHO05D007164 5.2e-31 139.4 196 55.1
PGSC0003DMG400011898 Solanum tuberosum HOM05D000011 ORTHO05D007164 8.9e-31 138.7 132 60.6
CAN.G681.49 Capsicum annuum HOM05D000011 ORTHO05D007164 1.2e-30 138.3 119 59.7
Solyc09g098100.4 Solanum lycopersicum HOM05D000011 ORTHO05D007164 1.2e-30 138.3 121 60.3
PGSC0003DMG400006571 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.4e-30 136.3 135 55.6
Solyc09g098130.3 Solanum lycopersicum HOM05D000011 ORTHO05D007164 7.5e-30 135.6 131 57.3
PGSC0003DMG400006570 Solanum tuberosum HOM05D000011 ORTHO05D007164 7.5e-30 135.6 122 60.7
CAN.G710.26 Capsicum annuum HOM05D000011 ORTHO05D007164 1.3e-29 134.8 120 59.2
Peaxi162Scf01366g00017 Petunia axillaris HOM05D000011 ORTHO05D007164 1.7e-29 134.4 122 60.7
PGSC0003DMG400011897 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.7e-29 134.4 130 54.6
Sopen09g036080 Solanum pennellii HOM05D000011 ORTHO05D007164 3.7e-29 133.3 131 55.7
Sopen09g036040 Solanum pennellii HOM05D000011 ORTHO05D007164 6.4e-29 132.5 121 61.2
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 8.3e-29 132.1 454 27.5
PGSC0003DMG400020851 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.1e-28 131.7 120 57.5
PGSC0003DMG402006288 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.1e-28 131.7 123 58.5
Nitab4.5_0001689g0080 Nicotiana tabacum HOM05D000011 ORTHO05D007164 5.4e-28 129.4 121 61.2
Nitab4.5_0001689g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 7.0e-28 129.0 123 57.7
CAN.G1552.6 Capsicum annuum HOM05D000011 ORTHO05D007164 1.2e-27 128.3 123 54.5
Sopen09g026370 Solanum pennellii HOM05D000011 ORTHO05D007164 7.8e-27 125.6 120 56.7
Peaxi162Scf00758g00012 Petunia axillaris HOM05D000011 ORTHO05D007164 2.3e-26 124.0 119 53.8
Nitab4.5_0000309g0160 Nicotiana tabacum HOM05D000011 ORTHO05D007164 3.9e-26 123.2 119 58.8
CAN.G616.14 Capsicum annuum HOM05D000011 ORTHO05D016876 8.6e-26 122.1 118 55.9
CAN.G710.24 Capsicum annuum HOM05D000011 ORTHO05D007164 3.6e-24 116.7 120 55.8
Nitab4.5_0004585g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 8.1e-24 115.5 119 56.3
Nitab4.5_0002781g0050 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.4e-23 114.8 120 54.2
CAN.G681.42 Capsicum annuum HOM05D000011 ORTHO05D007164 1.5e-22 111.3 128 52.3
Nitab4.5_0001689g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.0e-22 110.9 120 53.3
CAN.G681.57 Capsicum annuum HOM05D000011 ORTHO05D007164 5.8e-22 109.4 90 60.0
Nitab4.5_0001689g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 7.5e-22 109.0 119 50.4
Peaxi162Scf00654g00009 Petunia axillaris HOM05D000011 ORTHO05D007164 7.5e-22 109.0 121 51.2
Nitab4.5_0005938g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 9.9e-22 108.6 109 54.1
Nitab4.5_0004585g0050 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.9e-21 107.1 153 47.7
PGSC0003DMG400015588 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.9e-21 107.1 125 48.8
Nitab4.5_0008680g0010 Nicotiana tabacum HOM05D000011 ORTHO05D007164 6.4e-21 105.9 123 50.4
Peaxi162Scf00286g00530 Petunia axillaris HOM05D000011 ORTHO05D007164 6.4e-21 105.9 95 61.1
CAN.G681.56 Capsicum annuum HOM05D000011 ORTHO05D007164 1.4e-20 104.8 86 62.8
Nitab4.5_0004200g0030 Nicotiana tabacum HOM05D000011 ORTHO05D007164 5.4e-20 102.8 86 60.5
Sopen09g028110 Solanum pennellii HOM05D000011 ORTHO05D007164 5.4e-20 102.8 76 68.4
PGSC0003DMG400041167 Solanum tuberosum HOM05D000011 ORTHO05D007164 7.1e-20 102.4 126 48.4
CAN.G140.34 Capsicum annuum HOM05D000002 ORTHO05D000001 1.2e-19 101.7 121 62.8
CAN.G681.55 Capsicum annuum HOM05D000011 ORTHO05D007164 1.2e-19 101.7 76 67.1
Peaxi162Scf00758g00005 Petunia axillaris HOM05D000011 ORTHO05D007164 2.1e-19 100.9 135 48.1
CAN.G220.69 Capsicum annuum HOM05D000011 ORTHO05D007164 6.0e-19 99.4 80 60.0
PGSC0003DMG400011900 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.7e-18 97.8 105 49.5
PGSC0003DMG400031521 Solanum tuberosum HOM05D000011 ORTHO05D007164 3.0e-18 97.1 90 57.8
CAN.G681.46 Capsicum annuum HOM05D000011 ORTHO05D007164 1.5e-17 94.7 79 63.3
PGSC0003DMG400016628 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.9e-17 94.4 86 61.6
Peaxi162Scf00157g01645 Petunia axillaris HOM05D000011 ORTHO05D007164 9.5e-17 92.0 130 45.4
CAN.G600.3 Capsicum annuum HOM05D000011 ORTHO05D024769 1.2e-16 91.7 114 56.1
CAN.G616.13 Capsicum annuum HOM05D000011 ORTHO05D007164 1.2e-16 91.7 86 55.8
PGSC0003DMG400018619 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.6e-16 91.3 86 55.8
CAN.G220.9 Capsicum annuum HOM05D000011 ORTHO05D007164 2.1e-16 90.9 76 59.2
CAN.G681.58 Capsicum annuum HOM05D000011 ORTHO05D007164 2.8e-16 90.5 86 55.8
Nitab4.5_0005938g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 8.1e-16 89.0 71 60.6
CAN.G681.50 Capsicum annuum HOM05D000011 ORTHO05D007164 1.8e-15 87.8 76 63.2
CAN.G681.39 Capsicum annuum HOM05D000004 ORTHO05D000002 2.4e-15 87.4 122 41.0
Solyc09g064690.1 Solanum lycopersicum HOM05D000011 ORTHO05D007164 2.4e-15 87.4 90 47.8
PGSC0003DMG400043186 Solanum tuberosum HOM05D000011 ORTHO05D007164 5.2e-15 86.3 100 50.0
Peaxi162Scf01366g00007 Petunia axillaris HOM05D000011 ORTHO05D016876 6.8e-15 85.9 88 54.5
Nitab4.5_0006946g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 5.8e-14 82.8 74 60.8
CAN.G220.8 Capsicum annuum HOM05D000011 ORTHO05D007164 1.3e-13 81.6 119 45.4
Nitab4.5_0000032g0080 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.3e-13 81.6 101 45.5
Nitab4.5_0006210g0020 Nicotiana tabacum HOM05D000011 ORTHO05D007164 8.4e-13 79.0 68 55.9
Nitab4.5_0001689g0020 Nicotiana tabacum HOM05D000011 ORTHO05D007164 5.4e-12 76.3 80 47.5
Nitab4.5_0004585g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 5.4e-12 76.3 76 50.0
Nitab4.5_0008390g0020 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.2e-11 75.1 76 48.7
Solyc12g038900.1 Solanum lycopersicum HOM05D000011 ORTHO05D007164 1.2e-11 75.1 76 52.6
PGSC0003DMG401020874 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.6e-11 73.2 56 66.1
CAN.G681.29 Capsicum annuum HOM05D000011 ORTHO05D007164 7.8e-11 72.4 76 55.3
CAN.G461.5 Capsicum annuum HOM05D000011 ORTHO05D007164 1.0e-10 72.0 139 38.1
Nitab4.5_0004466g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.0e-10 72.0 85 44.7
PGSC0003DMG400011193 Solanum tuberosum HOM05D000011 ORTHO05D007164 3.9e-10 70.1 58 58.6
CAN.G681.30 Capsicum annuum HOM05D000011 ORTHO05D000018 5.1e-10 69.7 66 57.6
Peaxi162Scf00067g00026 Petunia axillaris HOM05D000011 ORTHO05D007164 6.6e-10 69.3 115 39.1
PGSC0003DMG400006577 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.9e-09 67.8 68 51.5
Nitab4.5_0009384g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.3e-09 66.6 99 41.4
PGSC0003DMG400016600 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.3e-09 66.6 45 71.1
CAN.G1042.2 Capsicum annuum HOM05D000107 ORTHO05D024769 5.6e-09 66.2 39 82.1
CAN.G681.54 Capsicum annuum HOM05D000011 ORTHO05D007164 1.2e-08 65.1 59 55.9
Peaxi162Scf00157g01646 Petunia axillaris HOM05D000011 ORTHO05D007164 1.2e-08 65.1 115 37.4
Nitab4.5_0000280g0230 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.6e-08 64.7 99 39.4
CAN.G220.67 Capsicum annuum HOM05D000011 ORTHO05D007164 2.1e-08 64.3 47 66.0
PGSC0003DMG400046201 Solanum tuberosum HOM05D003808 ORTHO05D007164 2.1e-08 64.3 64 48.4
PGSC0003DMG400015872 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.6e-08 63.5 88 42.0
CAN.G687.14 Capsicum annuum HOM05D000011 ORTHO05D016876 8.1e-08 62.4 60 55.0
Nitab4.5_0004200g0020 Nicotiana tabacum HOM05D000011 ORTHO05D007164 8.1e-08 62.4 94 40.4
Nitab4.5_0006226g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 8.1e-08 62.4 53 50.9
Hma1.2p1_0234F.1_g098390 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 1.4e-07 61.6 62 48.4
Nitab4.5_0003619g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.8e-07 61.2 90 37.8
Oeu006305.1 Olea europaea HOM05D000011 ORTHO05D000018 1.8e-07 61.2 62 45.2
PGSC0003DMG400007462 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.8e-07 61.2 71 42.3
Nitab4.5_0000280g0220 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.1e-07 60.5 62 48.4
PGSC0003DMG401026842 Solanum tuberosum HOM05D000011 ORTHO05D012366 3.1e-07 60.5 88 43.2
QL04p001863 Quercus lobata HOM05D000011 ORTHO05D000018 4.0e-07 60.1 156 26.3
PGSC0003DMG400002947 Solanum tuberosum HOM05D000011 ORTHO05D012366 4.0e-07 60.1 87 41.4
PGSC0003DMG401020721 Solanum tuberosum HOM05D000005 ORTHO05D000012 4.0e-07 60.1 43 62.8
PGSC0003DMG402020721 Solanum tuberosum HOM05D000005 ORTHO05D000012 4.0e-07 60.1 43 62.8
Nitab4.5_0007572g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.0e-07 58.9 124 29.0
Nitab4.5_0003268g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.2e-06 58.5 55 47.3
Nitab4.5_0004179g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.2e-06 58.5 47 53.2
Peaxi162Scf00004g01815 Petunia axillaris HOM05D000011 ORTHO05D000018 1.2e-06 58.5 114 31.6
CAN.G1832.1 Capsicum annuum HOM05D000011 ORTHO05D000018 1.5e-06 58.2 71 42.3
CAN.G362.9 Capsicum annuum HOM05D000011 ORTHO05D000018 1.5e-06 58.2 55 43.6
Nitab4.5_0000280g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.5e-06 58.2 76 43.4
Nitab4.5_0009633g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.5e-06 58.2 55 45.5
Peaxi162Scf00042g01313 Petunia axillaris HOM05D000011 ORTHO05D000018 2.0e-06 57.8 121 28.9
Cc11_g06560 Coffea canephora HOM05D000011 ORTHO05D000018 2.6e-06 57.4 225 26.2
Nitab4.5_0004200g0040 Nicotiana tabacum HOM05D000011 ORTHO05D016876 2.6e-06 57.4 50 60.0
Lj6C734T18 Lonicera japonica HOM05D000011 ORTHO05D000018 3.4e-06 57.0 62 46.8
Nitab4.5_0002067g0040 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.4e-06 57.0 57 42.1
Nitab4.5_0010227g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.4e-06 57.0 69 39.1
CSS0008112 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 4.4e-06 56.6 62 40.3
Nitab4.5_0000294g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.4e-06 56.6 63 38.1
Nitab4.5_0001553g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.4e-06 56.6 88 37.5
Solyc04g007070.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 4.4e-06 56.6 92 38.0
PGSC0003DMG400007471 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.4e-06 56.6 53 50.9
PGSC0003DMG400021861 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.4e-06 56.6 62 45.2
Nitab4.5_0009260g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 5.8e-06 56.2 101 30.7
Sopen10g004080 Solanum pennellii HOM05D000011 ORTHO05D000018 5.8e-06 56.2 62 45.2
PGSC0003DMG400023062 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.8e-06 56.2 59 49.2
CAN.G831.8 Capsicum annuum HOM05D000005 ORTHO05D024777 7.6e-06 55.8 32 81.2
Dinv01884 Davidia involucrata HOM05D000011 ORTHO05D000018 7.6e-06 55.8 55 45.5
Nitab4.5_0000053g0250 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 63 38.1
Nitab4.5_0002605g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 130 33.1
Nitab4.5_0004902g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 85 32.9
Nitab4.5_0008390g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 52 48.1
Nitab4.5_0022627g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 50 52.0
Solyc01g090430.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 55 43.6
Sopen04g002140 Solanum pennellii HOM05D000011 ORTHO05D000018 7.6e-06 55.8 92 38.0
PGSC0003DMG400019741 Solanum tuberosum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 52 50.0
PGSC0003DMG404026043 Solanum tuberosum HOM05D000011 ORTHO05D000018 7.6e-06 55.8 55 43.6
CAN.G656.34 Capsicum annuum HOM05D000011 ORTHO05D000018 9.9e-06 55.5 202 26.7
Nitab4.5_0007191g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 9.9e-06 55.5 76 38.2


User provided reference genes

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