Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 8.5e-48 193.4 99 100.0
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.2e-26 121.7 147 51.7
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 3.2e-26 121.7 147 51.7
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.9e-23 112.5 146 47.9
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 3.3e-23 111.7 147 47.6
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 5.6e-23 110.9 147 46.9
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 5.6e-23 110.9 147 46.9
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 5.6e-23 110.9 146 47.3
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 9.5e-23 110.2 147 47.6
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 3.6e-22 108.2 147 46.3
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 1.8e-21 105.9 141 48.2
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 6.8e-21 104.0 147 46.3
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.2e-20 103.2 141 46.8
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-20 102.4 147 44.9
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 3.4e-20 101.7 147 45.6
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 5.8e-20 100.9 147 44.2
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 7.5e-20 100.5 149 45.0
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 9.8e-20 100.1 105 56.2
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 3.7e-19 98.2 147 44.9
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 3.7e-19 98.2 147 43.5
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.1e-18 96.7 147 42.2
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 1.1e-18 96.7 147 42.2
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-18 96.3 146 41.8
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-18 96.3 146 41.8
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.9e-18 95.9 147 41.5
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.1e-18 94.7 147 41.5
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 5.4e-18 94.4 148 41.9
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 5.4e-18 94.4 148 41.9
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 5.4e-18 94.4 144 41.0
Solyc02g011740.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 2.0e-17 92.4 80 65.0
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 3.5e-17 91.7 115 50.4
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.7e-16 89.4 147 40.1
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 3.9e-16 88.2 146 40.4
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 1.5e-15 86.3 100 53.0
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 1.5e-15 86.3 88 55.7
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 1.6e-14 82.8 146 41.1
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 2.1e-14 82.4 105 50.5
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.8e-13 79.3 131 43.5
CAN.G386.25 Capsicum annuum HOM05D001200 ORTHO05D010401 2.3e-13 79.0 47 85.1
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 3.7e-11 71.6 47 74.5
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 4.9e-11 71.2 44 79.5
C06p42260 Brassica napus HOM05D001200 ORTHO05D010401 1.1e-10 70.1 46 78.3
BraSC25t45908Z Brassica rapa HOM05D001200 ORTHO05D010401 1.1e-10 70.1 46 78.3
BolSC45t60911H Brassica oleracea HOM05D001200 ORTHO05D010401 1.4e-10 69.7 45 80.0
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 1.9e-10 69.3 47 74.5
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 3.2e-10 68.6 45 73.3
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 9.2e-10 67.0 44 75.0
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 1.6e-09 66.2 44 75.0
Solyc01g065630.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.6e-09 66.2 49 71.4
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 2.7e-09 65.5 143 35.7
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 2.7e-09 65.5 45 68.9
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 4.6e-09 64.7 44 72.7
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 4.6e-09 64.7 44 72.7
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 4.6e-09 64.7 46 69.6
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 4.6e-09 64.7 45 68.9
Hund03917 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.6e-09 64.7 44 75.0
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 6.0e-09 64.3 44 68.2
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 7.8e-09 63.9 86 48.8
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.3e-08 63.2 44 68.2
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 3.0e-08 62.0 40 70.0
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 3.0e-08 62.0 44 70.5
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 6.6e-08 60.8 45 68.9
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.6e-08 60.5 44 68.2
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 8.6e-08 60.5 44 70.5
Solyc01g065640.3 Solanum lycopersicum HOM05D001200 ORTHO05D010401 8.6e-08 60.5 45 66.7
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 1.1e-07 60.1 44 65.9
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 3.3e-07 58.5 44 65.9
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 4.3e-07 58.2 49 63.3
Medtr4g106580 Medicago truncatula HOM05D001200 ORTHO05D002731 4.3e-07 58.2 47 59.6
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 5.6e-07 57.8 44 65.9
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 7.3e-07 57.4 43 67.4
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 9.5e-07 57.0 117 35.9
Medtr4g128700 Medicago truncatula HOM05D001200 ORTHO05D002731 1.2e-06 56.6 43 65.1
Medtr5g094180 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-06 56.2 44 63.6
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-06 55.8 44 61.4
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-06 55.8 43 62.8
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 2.8e-06 55.5 44 61.4
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-06 55.1 44 61.4
Medtr5g464700 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-06 55.1 43 62.8
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 4.7e-06 54.7 48 58.3
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 4.7e-06 54.7 44 56.8
CSS0005564 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 6.2e-06 54.3 37 75.7
CSS0038532 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 8.1e-06 53.9 37 75.7
Medtr0148s0110 Medicago truncatula HOM05D001200 ORTHO05D002731 8.1e-06 53.9 42 64.3
Medtr1g040655 Medicago truncatula HOM05D001200 ORTHO05D002731 8.1e-06 53.9 45 60.0


User provided reference genes

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