Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 9.4e-94 347.1 202 100.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 3.0e-63 245.7 171 85.4
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 6.8e-60 234.6 171 82.5
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.4e-59 232.3 171 78.9
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 7.5e-59 231.1 171 81.9
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 6.4e-58 228.0 171 83.6
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.9e-57 226.5 171 83.6
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.1e-45 186.4 166 76.5
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 4.6e-32 142.1 174 51.1
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.3e-31 139.8 171 55.6
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.1e-30 137.5 175 53.7
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.1e-30 137.5 156 58.3
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.1e-29 133.3 151 57.6
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 2.8e-29 132.9 171 52.0
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.1e-28 131.0 172 48.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 6.9e-28 128.3 172 52.3
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 3.4e-27 125.9 150 56.7
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 5.8e-27 125.2 154 55.8
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 7.6e-27 124.8 139 63.3
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 1.7e-26 123.6 150 53.3
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 6.4e-26 121.7 150 54.7
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.9e-25 120.2 141 57.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.4e-25 119.8 150 55.3
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.2e-25 119.4 156 54.5
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 5.4e-25 118.6 151 54.3
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.5e-24 115.9 175 52.0
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.5e-24 115.9 165 47.9
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 6.0e-24 115.2 168 50.0
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.3e-23 114.0 133 57.1
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.3e-23 113.2 150 57.3
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 3.0e-23 112.8 123 61.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 6.7e-23 111.7 172 47.7
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 8.7e-23 111.3 171 50.9
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 8.7e-23 111.3 102 68.6
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.9e-22 110.2 171 50.3
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.9e-22 110.2 171 48.0
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.9e-22 110.2 172 47.7
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 2.5e-22 109.8 161 51.6
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 4.3e-22 109.0 167 50.9
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 7.4e-22 108.2 151 53.0
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 9.6e-22 107.8 130 55.4
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.3e-21 107.5 150 50.7
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.3e-21 107.5 131 57.3
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.6e-21 107.1 178 46.1
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.8e-21 106.3 129 57.4
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 2.8e-21 106.3 96 68.8
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 3.7e-21 105.9 150 55.3
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.7e-21 105.9 150 55.3
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.7e-21 105.9 150 55.3
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 3.7e-21 105.9 167 47.3
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.8e-21 105.5 150 50.7
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 4.8e-21 105.5 95 76.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 4.8e-21 105.5 95 76.8
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 4.8e-21 105.5 178 48.9
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 4.8e-21 105.5 156 50.6
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 4.8e-21 105.5 150 52.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.8e-21 105.5 150 50.7
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 4.8e-21 105.5 150 49.3
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 6.2e-21 105.1 150 55.3
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 6.2e-21 105.1 150 51.3
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.1e-20 104.4 94 78.7
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.4e-20 104.0 157 51.0
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.8e-20 103.6 156 50.0
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.4e-20 103.2 103 58.3
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 5.3e-20 102.1 156 49.4
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.2e-19 100.9 154 54.5
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.5e-19 100.5 107 65.4
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 3.4e-19 99.4 164 46.3
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.4e-19 99.4 163 46.6
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.5e-19 99.0 141 50.4
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 4.5e-19 99.0 104 72.1
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.5e-19 99.0 171 44.4
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.0e-18 97.8 92 68.5
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.7e-18 97.1 91 69.2
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 2.9e-18 96.3 123 56.9
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 4.9e-18 95.5 91 70.3
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 6.5e-18 95.1 94 64.9
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 6.5e-18 95.1 123 54.5
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 8.4e-18 94.7 109 62.4
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.4e-17 94.0 92 66.3
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 2.5e-17 93.2 80 73.8
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 3.2e-17 92.8 95 66.3
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 4.2e-17 92.4 172 44.2
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 5.5e-17 92.0 87 67.8
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 7.1e-17 91.7 82 72.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.2e-16 90.9 80 72.5
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 3.5e-16 89.4 133 51.1
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 6.0e-16 88.6 151 47.7
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.0e-15 87.8 82 76.8
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.0e-15 86.3 78 70.5
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.5e-14 84.0 87 67.8
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.3e-14 82.4 89 66.3
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 7.4e-14 81.6 89 62.9
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.1e-13 80.1 87 67.8
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 2.8e-13 79.7 94 55.3
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 4.8e-13 79.0 78 69.2
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 8.2e-13 78.2 94 62.8
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.1e-12 77.8 122 51.6
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 3.1e-12 76.3 123 42.3
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 5.3e-12 75.5 108 55.6
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.5e-11 72.4 82 65.9
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.3e-10 70.9 174 37.4
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 6.7e-07 58.5 71 63.4


User provided reference genes

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