Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G947.38 Capsicum annuum HOM05D005652 ORTHO05D007300 2.0e-56 222.2 113 100.0
Peaxi162Scf00876g00433 Petunia axillaris HOM05D005652 ORTHO05D007300 1.3e-31 139.8 70 97.1
Solyc12g096120.2 Solanum lycopersicum HOM05D005652 ORTHO05D007300 2.8e-31 138.7 70 97.1
Sopen12g032000 Solanum pennellii HOM05D005652 ORTHO05D007300 2.8e-31 138.7 70 97.1
PGSC0003DMG400029291 Solanum tuberosum HOM05D005652 ORTHO05D007300 2.8e-31 138.7 70 97.1
Nitab4.5_0000030g0080 Nicotiana tabacum HOM05D005652 ORTHO05D007300 3.7e-31 138.3 70 95.7
Solyc08g075780.4 Solanum lycopersicum HOM05D005652 ORTHO05D007300 3.7e-31 138.3 70 95.7
Nitab4.5_0013867g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 8.3e-31 137.1 70 94.3
PGSC0003DMG400030853 Solanum tuberosum HOM05D005652 ORTHO05D007300 1.1e-30 136.7 70 95.7
Peaxi162Scf00408g00839 Petunia axillaris HOM05D005652 ORTHO05D007300 1.4e-30 136.3 68 97.1
Dinv27358 Davidia involucrata HOM05D005652 ORTHO05D007300 4.1e-30 134.8 67 97.0
Oeu050252.1 Olea europaea HOM05D005652 ORTHO05D007300 5.4e-30 134.4 68 95.6
CAN.G1483.5 Capsicum annuum HOM05D005652 ORTHO05D007300 1.2e-29 133.3 70 94.3
Nitab4.5_0000943g0120 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.6e-29 132.9 70 94.3
Nitab4.5_0014082g0020 Nicotiana tabacum HOM05D005652 ORTHO05D007300 1.6e-29 132.9 70 94.3
Oeu050889.1 Olea europaea HOM05D005652 ORTHO05D007300 2.7e-29 132.1 68 97.1
THA.LOC104813142 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 2.7e-29 132.1 65 100.0
arahy.Tifrunner.gnm1.ann1.AJPJ4J Arachis hypogaea HOM05D005652 ORTHO05D007300 4.5e-29 131.3 67 97.0
arahy.Tifrunner.gnm1.ann1.KZ1VTZ Arachis hypogaea HOM05D005652 ORTHO05D007300 4.5e-29 131.3 67 97.0
CiPaw.05G226800 Carya illinoinensis HOM05D005652 ORTHO05D007300 4.5e-29 131.3 67 97.0
Haze_00495 Corylus avellana HOM05D000102 ORTHO05D003793 4.5e-29 131.3 67 97.0
Lj1g0016776 Lotus japonicus HOM05D005652 ORTHO05D007300 4.5e-29 131.3 67 97.0
Ca_19025_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 5.9e-29 131.0 67 97.0
Ca_26775_v3 Cicer arietinum L. HOM05D005652 ORTHO05D007300 5.9e-29 131.0 67 97.0
Ciclev10002945m.g Citrus clementina HOM05D005652 ORTHO05D007300 5.9e-29 131.0 67 97.0
Psat2g096080 Pisum sativum HOM05D005652 ORTHO05D007300 5.9e-29 131.0 67 97.0
Medtr5g059210 Medicago truncatula HOM05D005652 ORTHO05D007300 7.8e-29 130.6 67 97.0
Atru.chr13.1343 Acer truncatum HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
MSTRG.1473 Avicennia marina HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
CSS0012578 Camellia sinensis var. sinensis HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
CANSAT54G2625 Cannabis sativa HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
ClCG03G009400 Citrullus lanatus HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Cc06_g19090 Coffea canephora HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
MELO3C003038.2 Cucumis melo HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
CsaV3_5G023210 Cucumis sativus L. HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Duzib041G0199 Durio zibethinus HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Duzib093G1773 Durio zibethinus HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Migut.C01167 Erythranthe guttata HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Migut.N03303 Erythranthe guttata HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Eucgr.F03755 Eucalyptus grandis HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Glyma.04G252400 Glycine max HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Glyma.06G110100 Glycine max HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Glyma.14G163800 Glycine max HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Gohir.A06G041900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Gohir.D06G042900 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Gorai.005G091100 Gossypium raimondii HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Gorai.010G048100 Gossypium raimondii HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Hma1.2p1_0009F.1_g006210 Hydrangea macrophylla HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Lalb_Chr08g0241571 Lupinus albus HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Lalb_Chr23g0270881 Lupinus albus HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
MD08G1169400 Malus domestica HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
MD15G1356000 Malus domestica HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Manes.18G074500 Manihot esculenta HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Nn5g28127 Nelumbo nucifera HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Os01g0962400 Oryza sativa ssp. japonica HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
PSO170G5049 Papaver somniferum HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
PSO528G0083 Papaver somniferum HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Phvul.009G121900 Phaseolus vulgaris HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Potri.002G087200 Populus trichocarpa HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Rhsim11G0066600 Rhododendron simsii HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
RcHm_v2.0_Chr6g0294951 Rosa chinensis HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Sabra02G0068700 Salix brachista HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
SalBow7G3105 Salvia bowleyana HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Sed0000902 Sechium edule HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Hund16832 Selenicereus undatus HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
THA.LOC104817112 Tarenaya hassleriana HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Thecc.08G119900 Theobroma cacao HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
TPR.G8501 Trifolium pratense HOM05D005652 ORTHO05D007300 1.3e-28 129.8 67 95.5
TWI12G1472 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
TWI56G0667 Tripterygium wilfordii HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
GSVIVG01008919001 Vitis vinifera HOM05D005652 ORTHO05D007300 1.3e-28 129.8 64 100.0
Zm00001eb140360 Zea mays HOM05D005652 ORTHO05D007300 1.3e-28 129.8 68 94.1
AUR62023629 Chenopodium quinoa HOM05D000102 ORTHO05D003793 1.7e-28 129.4 70 92.9
TAR376G0464 Trochodendron aralioides HOM05D005652 ORTHO05D007300 1.7e-28 129.4 71 91.5
Aa31LG4G7830 Aethionema arabicum HOM05D005652 ORTHO05D007300 2.3e-28 129.0 67 92.5
AL2G37930 Arabidopsis lyrata HOM05D005652 ORTHO05D007300 2.3e-28 129.0 67 92.5
CARHR071220 Cardamine hirsuta HOM05D005652 ORTHO05D007300 2.3e-28 129.0 67 92.5
Sp5g32880 Schrenkiella parvula HOM05D005652 ORTHO05D007300 2.3e-28 129.0 67 92.5
Ah.05g172270 Amaranthus hybridus HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
Aqoxy6G01736 Aquilegia oxysepala HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
MSTRG.22423 Avicennia marina HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
FAN15G0151 Fragaria x ananassa HOM05D000102 ORTHO05D003793 2.9e-28 128.6 64 98.4
FAN20G1151 Fragaria x ananassa HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
FAN24G1202 Fragaria x ananassa HOM05D000102 ORTHO05D003793 2.9e-28 128.6 64 98.4
FAN27G1241 Fragaria x ananassa HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
Potri.005G173800 Populus trichocarpa HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
Prupe.1G503300 Prunus persica HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
PGR042G1865 Punica granatum HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
Hund27043 Selenicereus undatus HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
Sc23g0000830 Simmondsia chinensis HOM05D005652 ORTHO05D007300 2.9e-28 128.6 64 98.4
BcaB02g07127 Brassica carinata HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
BcaB05g25069 Brassica carinata HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
BcaC03g15763 Brassica carinata HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
BcaC08g45458 Brassica carinata HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
A07p27870 Brassica napus HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
C06p30860 Brassica napus HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
BolC6t38248H Brassica oleracea HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
BraA07t30426Z Brassica rapa HOM05D005652 ORTHO05D007300 3.8e-28 128.3 66 93.9
CDE06G1598 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 3.8e-28 128.3 63 100.0
CDE08G1473 Ceratophyllum demersum HOM05D005652 ORTHO05D007300 3.8e-28 128.3 63 100.0
HanXRQChr14g0432351 Helianthus annuus HOM05D005652 ORTHO05D007300 3.8e-28 128.3 64 98.4
MBI09_g06382_MAGBIO Magnolia biondii HOM05D005652 ORTHO05D007300 3.8e-28 128.3 64 98.4
SGA_v2.0_scaffold24G10489 Striga asiatica HOM05D005652 ORTHO05D007300 3.8e-28 128.3 63 100.0
ATR0041G005 Amborella trichopoda HOM05D005652 ORTHO05D007300 5.0e-28 127.9 64 98.4
AT1G77710 Arabidopsis thaliana HOM05D005652 ORTHO05D007300 5.0e-28 127.9 64 96.9
Carub.0002s2459 Capsella rubella HOM05D005652 ORTHO05D007300 5.0e-28 127.9 64 96.9
Thhalv10019370m.g Eutrema salsugineum HOM05D005652 ORTHO05D007300 5.0e-28 127.9 67 91.0
Gohir.A02G074200 Gossypium hirsutum HOM05D005652 ORTHO05D007300 5.0e-28 127.9 64 98.4
unitig_37.g12684 Utricularia gibba HOM05D005652 ORTHO05D007300 5.0e-28 127.9 64 98.4
FvH4_2g26390 Fragaria vesca HOM05D005652 ORTHO05D007300 6.6e-28 127.5 64 96.9
Lsat_1_v5_gn_5_65281 Lactuca sativa HOM05D005652 ORTHO05D007300 8.6e-28 127.1 64 96.9
Gohir.D02G081400 Gossypium hirsutum HOM05D005652 ORTHO05D007300 1.5e-27 126.3 64 98.4
EL10Ac1g00017 Beta vulgaris HOM05D005652 ORTHO05D007300 1.9e-27 125.9 64 96.9
Glyma.13G082800 Glycine max HOM05D005652 ORTHO05D007300 1.9e-27 125.9 64 96.9
CBR_g44443 Chara braunii HOM05D005652 ORTHO05D007300 2.5e-27 125.6 64 95.3
PRCOL_00001930 Prasinoderma coloniale HOM05D005652 ORTHO05D007300 4.3e-27 124.8 65 93.8
Pp3c6_16720 Physcomitrium patens HOM05D005652 ORTHO05D007300 5.6e-27 124.4 63 96.8
ECA238G1260 Erigeron canadensis HOM05D005652 ORTHO05D007300 9.5e-27 123.6 69 88.4
AagrBONN_evm.TU.Sc2ySwM_362.1619 Anthoceros agrestis HOM05D005652 ORTHO05D007300 1.2e-26 123.2 63 95.2
Mapoly0081s0039 Marchantia polymorpha HOM05D005652 ORTHO05D007300 1.2e-26 123.2 63 95.2
SMO147G0269 Selaginella moellendorffii HOM05D005652 ORTHO05D007300 4.0e-25 118.2 62 93.5
Actinidia02604 Actinidia chinensis HOM05D005652 ORTHO05D007300 1.2e-24 116.7 84 75.0
Haze_27250 Corylus avellana HOM05D005652 ORTHO05D007300 4.6e-21 104.8 61 82.0
BraA02t07181Z Brassica rapa HOM05D005652 ORTHO05D007300 9.5e-19 97.1 66 77.3
BolC2t09520H Brassica oleracea HOM05D005652 ORTHO05D007300 1.4e-17 93.2 47 91.5
QL09p036189 Quercus lobata HOM05D005652 ORTHO05D007300 6.8e-17 90.9 154 41.6
Oeu026729.1 Olea europaea HOM05D005652 ORTHO05D007300 2.6e-16 89.0 44 100.0
SalBow7G1395 Salvia bowleyana HOM05D005652 ORTHO05D007300 1.3e-15 86.7 43 100.0
HPP92_028057 Vanilla planifolia HOM05D005652 ORTHO05D007300 1.3e-15 86.7 43 100.0
Oeu062544.1 Olea europaea HOM05D005652 ORTHO05D007300 7.0e-14 80.9 65 67.7
Sed0022236 Sechium edule HOM05D005652 ORTHO05D007300 6.2e-10 67.8 31 100.0
Cpa.g.sc36.14 Carica papaya HOM05D005652 ORTHO05D007300 2.3e-09 65.9 42 83.3
AUR62004713 Chenopodium quinoa HOM05D005652 ORTHO05D007300 5.2e-09 64.7 32 100.0
COL.COLO4_38344 Corchorus olitorius HOM05D005652 ORTHO05D007300 5.2e-09 64.7 32 100.0
TAR381G0412 Trochodendron aralioides HOM05D000102 ORTHO05D003793 1.2e-08 63.5 32 96.9
Actinidia13808 Actinidia chinensis HOM05D005652 ORTHO05D007300 9.9e-08 60.5 32 90.6
Actinidia34351 Actinidia chinensis HOM05D005652 ORTHO05D057191 5.4e-06 54.7 32 81.2
CAN.G694.96 Capsicum annuum HOM05D000185 ORTHO05D000368 7.1e-06 54.3 41 73.2


User provided reference genes

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