Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 3.4e-192 674.9 352 100.0
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.9e-116 421.0 374 65.5
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.2e-115 420.6 381 65.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 9.3e-113 411.0 360 65.3
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.7e-112 409.5 381 62.5
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 3.5e-112 409.1 381 62.7
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 6.0e-112 408.3 360 64.7
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.3e-111 407.1 405 60.0
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 3.0e-111 406.0 378 63.5
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.0e-111 406.0 421 58.9
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 6.6e-111 404.8 378 63.0
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.9e-110 403.3 381 61.7
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 4.8e-109 398.7 380 62.6
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.1e-108 396.0 378 60.8
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.3e-106 390.6 378 60.8
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.4e-106 388.3 430 56.0
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 2.7e-104 382.9 325 66.5
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.0e-103 380.9 325 66.8
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 4.3e-102 375.6 375 60.0
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 4.3e-102 375.6 378 59.0
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 6.9e-100 368.2 374 59.1
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.2e-99 367.5 381 57.0
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 4.5e-99 365.5 347 60.5
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 5.8e-99 365.2 381 56.7
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.3e-98 364.0 376 56.9
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.3e-98 364.0 355 59.7
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.7e-98 363.6 380 56.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.4e-98 361.7 373 57.9
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 6.4e-98 361.7 364 58.8
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 8.4e-98 361.3 364 58.2
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 5.5e-97 358.6 323 64.4
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 9.3e-97 357.8 365 57.8
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 3.5e-96 355.9 355 58.0
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 3.5e-96 355.9 365 57.3
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 3.0e-95 352.8 368 58.2
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-95 352.8 362 57.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 3.9e-95 352.4 341 60.4
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 8.7e-95 351.3 360 58.3
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 8.7e-95 351.3 352 59.4
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.1e-94 350.9 364 57.1
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.5e-94 349.7 353 59.2
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.3e-94 349.4 355 56.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 5.6e-94 348.6 352 59.1
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.6e-93 347.1 352 58.8
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 2.8e-93 346.3 377 55.2
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.7e-93 345.9 352 58.8
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.7e-93 345.9 355 58.0
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 4.8e-93 345.5 376 55.6
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 4.8e-93 345.5 348 59.2
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.1e-92 344.4 355 58.0
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.4e-92 344.0 376 55.1
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.4e-92 343.2 371 55.5
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.1e-92 342.8 361 56.8
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 5.3e-92 342.0 355 56.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 9.0e-92 341.3 365 55.6
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 9.0e-92 341.3 354 57.1
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.0e-91 340.1 377 54.4
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.6e-91 339.7 374 56.7
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.4e-91 339.3 372 55.1
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.7e-90 337.0 379 54.6
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.7e-90 337.0 372 55.4
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 2.9e-90 336.3 356 56.2
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.8e-90 335.9 300 63.7
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 6.5e-90 335.1 365 54.5
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-89 334.3 346 56.6
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.1e-89 334.3 413 51.1
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.4e-89 334.0 390 54.1
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.4e-89 334.0 375 53.6
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.9e-89 333.6 379 54.4
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.2e-88 330.9 372 55.1
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.6e-88 330.5 375 54.1
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.6e-88 330.5 345 58.8
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 2.7e-88 329.7 345 60.6
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.0e-87 327.8 387 51.2
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 2.8e-85 319.7 352 53.7
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 8.2e-85 318.2 359 54.6
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.1e-84 315.8 380 52.9
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.5e-83 313.9 352 54.5
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 3.8e-82 309.3 308 58.4
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.5e-81 306.6 349 53.0
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 9.3e-81 304.7 370 52.4
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.3e-79 300.8 351 51.3
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.5e-78 297.4 348 52.9
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 7.4e-78 295.0 346 51.2
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 1.3e-77 294.3 348 50.3
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.8e-77 293.1 305 58.0
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 3.7e-77 292.7 353 51.8
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 4.8e-77 292.4 305 57.7
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.2e-75 287.7 365 50.4
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 5.5e-73 278.9 383 47.0
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 3.6e-72 276.2 350 48.3
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.1e-70 271.2 369 46.9
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-70 270.8 359 47.9
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.5e-70 270.8 370 46.8
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 2.0e-70 270.4 360 47.8
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 2.0e-70 270.4 360 47.8
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 7.4e-70 268.5 363 47.4
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 6.9e-68 261.9 383 44.1
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 8.5e-66 255.0 361 46.3
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.4e-65 254.2 377 46.4
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.4e-65 254.2 377 46.4
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.2e-64 251.1 382 45.0
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 1.2e-64 251.1 382 45.0
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.6e-64 250.8 382 45.0
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.1e-64 248.8 237 59.5
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.4e-63 247.7 239 59.8
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 3.3e-62 243.0 340 46.2
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.2e-59 234.6 215 60.0
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 1.7e-45 187.6 139 69.8
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 2.3e-39 167.2 114 71.1
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 1.6e-27 127.9 340 30.6
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 1.5e-22 111.3 141 48.9
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 7.5e-22 109.0 129 54.3
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.3e-21 108.2 372 27.7
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 1.9e-20 104.4 75 70.7
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 7.0e-20 102.4 94 60.6
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 6.0e-19 99.4 344 27.0
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 6.6e-18 95.9 331 27.5
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.6e-16 91.3 122 50.8
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 3.6e-16 90.1 125 48.8
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 5.2e-15 86.3 161 42.2
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 1.5e-14 84.7 121 47.1
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 3.4e-14 83.6 198 35.4
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 8.9e-07 58.9 69 46.4
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.5e-06 58.2 48 56.2


User provided reference genes

Program Settings