Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 5.1e-102 374.4 188 100.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 8.8e-94 347.1 188 93.6
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.1e-88 330.1 188 88.8
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.4e-88 329.7 188 89.4
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.6e-87 326.2 178 93.8
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 5.9e-74 281.2 167 80.2
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.3e-73 280.0 188 73.4
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 4.2e-72 275.0 189 74.1
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.2e-71 273.5 188 72.9
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.2e-71 273.5 188 72.9
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 8.0e-71 270.8 190 69.5
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 2.3e-70 269.2 165 77.6
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.3e-70 269.2 158 81.6
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.5e-69 266.5 188 68.6
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.5e-69 266.5 189 69.8
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 3.4e-69 265.4 175 73.1
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 3.4e-69 265.4 189 68.8
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 5.7e-69 264.6 169 74.0
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 9.8e-69 263.8 179 70.9
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.3e-68 263.5 181 69.6
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.3e-68 263.5 181 68.0
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.3e-68 263.5 175 72.0
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.2e-68 262.7 188 68.1
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 2.8e-68 262.3 189 66.7
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.8e-68 262.3 188 68.1
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 4.8e-68 261.5 188 68.1
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.4e-67 260.0 190 65.8
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.4e-67 260.0 188 67.6
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 1.4e-67 260.0 182 69.8
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.8e-67 259.6 184 67.4
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.1e-67 258.8 188 67.0
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 3.1e-67 258.8 175 74.9
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 7.0e-67 257.7 165 71.5
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.0e-66 256.1 185 67.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 2.7e-66 255.8 189 67.2
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 3.5e-66 255.4 185 64.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 4.5e-66 255.0 168 69.0
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 4.5e-66 255.0 180 68.9
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.5e-66 255.0 166 71.1
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.7e-65 253.1 179 68.7
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.7e-65 253.1 165 75.2
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.9e-65 252.3 165 68.5
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 5.0e-65 251.5 175 70.3
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 8.6e-65 250.8 169 71.0
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.5e-64 249.2 166 68.1
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 2.5e-64 249.2 170 70.0
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 5.5e-64 248.1 173 65.9
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 7.2e-64 247.7 172 65.1
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 7.2e-64 247.7 162 72.8
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 9.5e-64 247.3 177 68.4
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 1.2e-63 246.9 173 65.3
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.1e-63 246.1 186 66.7
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 2.1e-63 246.1 189 62.4
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 2.1e-63 246.1 189 62.4
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 2.8e-63 245.7 211 59.2
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 3.6e-63 245.4 173 65.3
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 4.7e-63 245.0 204 59.8
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 8.0e-63 244.2 171 67.8
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.0e-62 243.8 187 62.0
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 1.8e-62 243.0 173 64.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 1.8e-62 243.0 189 61.4
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 2.3e-62 242.7 158 70.9
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.0e-62 242.3 189 60.3
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 7.5e-61 237.7 176 63.6
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.3e-60 236.9 173 63.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-60 236.9 160 67.5
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 2.8e-60 235.7 192 63.0
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 4.9e-60 235.0 158 69.0
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 8.3e-60 234.2 178 66.9
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.1e-59 233.8 158 68.4
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 2.4e-59 232.6 173 61.8
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 3.5e-58 228.8 177 63.8
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 5.9e-58 228.0 246 51.6
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.3e-56 221.9 162 67.3
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 1.6e-55 219.9 188 59.0
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 2.3e-54 216.1 180 61.7
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 3.0e-54 215.7 138 72.5
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.2e-53 213.8 154 64.9
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.0e-53 213.0 161 59.6
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 3.4e-53 212.2 125 82.4
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 7.0e-51 204.5 149 62.4
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 3.3e-48 195.7 181 51.9
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 9.5e-48 194.1 170 51.2
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 4.7e-47 191.8 165 57.0
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.1e-46 190.7 97 94.8
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.3e-46 189.5 167 58.7
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 4.0e-46 188.7 169 52.1
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 5.2e-46 188.3 139 66.9
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 5.2e-46 188.3 190 52.6
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.0e-45 186.4 97 92.8
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 9.8e-45 184.1 177 56.5
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.9e-43 179.9 158 53.8
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 2.4e-43 179.5 124 69.4
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.2e-42 177.2 119 68.1
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 6.6e-41 171.4 98 87.8
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 4.3e-40 168.7 155 56.1
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.2e-39 167.2 132 56.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 4.0e-38 162.2 168 44.6
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.3e-36 157.1 117 66.7
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 2.2e-36 156.4 100 72.0
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 3.7e-36 155.6 109 70.6
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 6.4e-36 154.8 162 46.9
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 8.3e-36 154.5 113 65.5
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 3.2e-35 152.5 103 69.9
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 3.5e-34 149.1 109 63.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.6e-34 148.7 102 69.6
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 9.5e-32 141.0 88 73.9
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 1.6e-31 140.2 97 66.0
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.8e-28 129.0 75 84.0
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 7.8e-26 121.3 98 63.3
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.7e-25 120.2 130 49.2
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 3.0e-25 119.4 138 45.7
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.4e-19 99.8 78 61.5
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 9.3e-19 97.8 155 31.6
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.3e-17 94.0 92 52.2
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.9e-16 90.1 49 85.7
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 1.2e-10 70.9 50 62.0
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 6.2e-07 58.5 36 75.0


User provided reference genes

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