Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 7.3e-118 427.2 206 100.0
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.1e-94 350.1 199 84.9
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.1e-94 350.1 199 84.9
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 1.3e-93 346.7 201 82.6
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 2.4e-92 342.4 198 83.8
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 5.5e-89 331.3 202 79.2
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.5e-86 323.2 189 81.0
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.6e-86 321.2 197 77.7
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 1.7e-66 256.5 193 62.7
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.2e-65 251.9 193 62.2
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 5.5e-65 251.5 183 66.7
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 2.0e-62 243.0 202 61.4
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 3.3e-62 242.3 191 60.2
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 9.7e-62 240.7 194 59.8
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 9.7e-62 240.7 186 60.8
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 2.2e-61 239.6 190 60.5
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 2.2e-61 239.6 190 60.5
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 4.8e-61 238.4 192 59.4
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 6.3e-61 238.0 194 58.8
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 6.3e-61 238.0 201 56.2
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 6.3e-61 238.0 186 61.3
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 4.1e-60 235.3 187 57.8
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 5.3e-60 235.0 183 61.2
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 9.1e-60 234.2 196 58.2
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.2e-59 233.8 187 60.4
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 2.0e-59 233.0 188 57.4
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 2.6e-59 232.6 188 58.0
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 4.5e-59 231.9 190 60.0
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 4.5e-59 231.9 188 59.0
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 5.9e-59 231.5 193 60.1
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.7e-58 229.9 183 58.5
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 2.2e-58 229.6 188 58.0
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 2.9e-58 229.2 179 57.5
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 2.9e-58 229.2 184 59.2
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 6.5e-58 228.0 182 58.8
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 8.5e-58 227.6 186 55.4
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 1.4e-57 226.9 189 60.3
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 1.4e-57 226.9 186 55.4
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.4e-57 226.9 190 57.4
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 1.9e-57 226.5 190 58.4
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 4.2e-57 225.3 214 52.8
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 5.5e-57 224.9 179 55.9
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 9.4e-57 224.2 188 55.9
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 1.6e-56 223.4 181 58.6
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 4.7e-56 221.9 182 61.5
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 6.1e-56 221.5 186 58.6
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 7.9e-56 221.1 186 54.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 6.7e-55 218.0 181 58.0
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 8.8e-55 217.6 179 59.8
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 8.8e-55 217.6 185 56.8
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.1e-54 217.2 191 56.5
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 2.6e-54 216.1 187 56.1
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 3.3e-54 215.7 185 55.7
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.3e-54 215.7 173 56.6
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 3.3e-54 215.7 188 52.7
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 4.4e-54 215.3 181 56.9
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 5.7e-54 214.9 177 58.8
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 5.7e-54 214.9 183 57.4
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 1.7e-53 213.4 194 54.1
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.8e-53 212.6 194 56.7
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.1e-52 210.7 187 54.0
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.4e-52 210.3 186 51.6
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 2.4e-52 209.5 164 59.8
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 4.1e-52 208.8 185 56.2
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 5.3e-52 208.4 200 55.0
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.6e-51 206.8 198 48.0
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 1.6e-51 206.8 179 56.4
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 3.5e-51 205.7 180 55.6
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 5.9e-51 204.9 169 59.2
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 5.0e-50 201.8 177 54.2
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 4.2e-49 198.7 180 56.1
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.0e-43 179.9 203 46.8
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 2.2e-42 176.4 185 44.9
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 5.0e-42 175.3 181 48.1
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 1.3e-34 150.6 184 45.1
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 3.8e-34 149.1 198 40.4
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.2e-33 145.6 169 49.7
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 9.5e-33 144.4 258 32.6
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 4.7e-32 142.1 270 31.5
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.8e-31 138.3 171 42.1
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 2.4e-28 129.8 214 36.0
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.2e-27 127.5 178 40.4
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.7e-26 123.6 194 36.6
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 2.3e-26 123.2 83 66.3
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.3e-25 119.0 123 46.3
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 7.3e-25 118.2 195 33.8
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-23 113.2 164 40.9
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-23 113.2 206 36.4
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.5e-22 110.5 182 33.5
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.6e-22 109.8 180 35.6
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.8e-22 107.8 185 34.1
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.3e-21 107.5 207 34.3
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.4e-20 103.2 188 35.6
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.4e-20 103.2 110 50.0
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 4.1e-20 102.4 87 58.6
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 4.7e-16 89.0 98 43.9
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 4.9e-13 79.0 113 37.2
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 3.5e-11 72.8 179 27.4
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.6e-11 72.4 78 44.9
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 6.0e-11 72.0 126 33.3
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 3.0e-10 69.7 123 33.3
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.0e-10 68.9 102 37.3
COL.COLO4_13576 Corchorus olitorius HOM05D007512 ORTHO05D020513 8.1e-08 61.6 113 33.6
PGSC0003DMG400003669 Solanum tuberosum HOM05D007512 ORTHO05D009524 3.1e-07 59.7 45 66.7
Manes.10G123525 Manihot esculenta HOM05D007512 ORTHO05D020513 2.6e-06 56.6 113 26.5


User provided reference genes

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