Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-70 268.9 136 100.0
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 8.6e-67 256.9 136 97.8
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 8.1e-65 250.4 136 94.9
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 7.6e-63 243.8 136 92.6
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-62 242.7 136 92.6
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-55 219.9 136 85.3
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-55 218.8 136 85.3
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-50 202.6 136 78.7
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-50 201.8 115 90.4
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-49 199.9 132 80.3
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-48 196.8 135 76.3
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-42 175.6 121 76.9
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 2.8e-41 172.2 125 74.4
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 1.8e-40 169.5 136 69.9
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 3.8e-38 161.8 132 70.5
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 3.8e-38 161.8 132 71.2
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 3.8e-38 161.8 132 70.5
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-37 160.2 132 69.7
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-37 159.5 132 70.5
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 5.5e-37 157.9 132 68.9
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 4.6e-36 154.8 117 74.4
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 4.6e-36 154.8 132 68.9
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 3.0e-35 152.1 132 68.2
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 2.8e-33 145.6 135 63.0
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-32 143.7 151 57.6
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-31 139.0 132 62.1
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 6.5e-30 134.4 81 82.7
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-27 126.7 99 67.7
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.3e-27 125.9 102 66.7
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.9e-26 122.9 102 64.7
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 3.3e-26 122.1 120 61.7
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 9.7e-26 120.6 120 60.8
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 9.7e-26 120.6 120 60.8
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 2.0e-23 112.8 102 61.8
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 2.2e-17 92.8 118 45.8
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 2.4e-16 89.4 55 80.0
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 1.4e-13 80.1 110 45.5
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 2.5e-13 79.3 110 44.5
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 3.2e-13 79.0 110 43.6
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 4.2e-13 78.6 110 43.6
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 4.2e-13 78.6 110 43.6
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 4.2e-13 78.6 110 43.6
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 4.2e-13 78.6 110 43.6
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 4.2e-13 78.6 110 43.6
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 4.2e-13 78.6 107 43.0
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 5.5e-13 78.2 55 74.5
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 7.2e-13 77.8 107 44.9
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 9.4e-13 77.4 110 44.5
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 9.4e-13 77.4 110 44.5
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 1.6e-12 76.6 91 49.5
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 2.1e-12 76.3 91 47.3
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 2.7e-12 75.9 118 39.0
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 3.6e-12 75.5 110 40.9
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 6.1e-12 74.7 115 40.0
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 6.1e-12 74.7 115 40.0
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 7.9e-12 74.3 110 43.6
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 2.3e-11 72.8 115 40.0
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 2.3e-11 72.8 108 41.7
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 5.1e-11 71.6 107 39.3
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 8.8e-11 70.9 108 39.8
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 1.1e-10 70.5 108 41.7
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 1.5e-10 70.1 107 38.3
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 2.0e-10 69.7 91 47.3
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 2.6e-10 69.3 107 42.1
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 3.3e-10 68.9 107 42.1
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 3.3e-10 68.9 107 43.0
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 3.3e-10 68.9 110 42.7
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 3.3e-10 68.9 107 39.3
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 3.3e-10 68.9 109 40.4
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 3.3e-10 68.9 145 32.4
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 5.7e-10 68.2 107 42.1
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 5.7e-10 68.2 107 45.8
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 7.4e-10 67.8 97 44.3
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 7.4e-10 67.8 110 39.1
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 9.7e-10 67.4 107 40.2
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 9.7e-10 67.4 119 39.5
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 3.7e-09 65.5 113 36.3
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 6.3e-09 64.7 107 39.3
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 6.3e-09 64.7 107 38.3
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 8.2e-09 64.3 101 41.6
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 1.1e-08 63.9 89 38.2
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 1.4e-08 63.5 99 37.4
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 1.8e-08 63.2 92 34.8
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.4e-08 62.8 89 38.2
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 2.4e-08 62.8 91 41.8
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 3.1e-08 62.4 89 38.2
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 3.1e-08 62.4 118 36.4
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 7.0e-08 61.2 107 37.4
CAN.G623.100 Capsicum annuum HOM05D002887 ORTHO05D003159 9.1e-08 60.8 47 66.0
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 9.1e-08 60.8 88 42.0
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.6e-07 59.3 89 37.1
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 4.5e-07 58.5 109 34.9


User provided reference genes

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