Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 1.3e-224 782.7 397 100.0
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.5e-199 699.5 397 89.7
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 1.9e-194 682.6 390 88.7
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 2.1e-174 615.9 439 76.5
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.9e-155 552.4 443 67.3
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 4.2e-154 548.5 441 66.4
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 7.9e-153 544.3 438 65.5
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 1.8e-152 543.1 443 65.5
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 1.1e-151 540.4 425 66.8
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 3.3e-151 538.9 447 65.1
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 7.4e-151 537.7 436 64.0
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 9.7e-151 537.3 435 64.4
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 9.7e-151 537.3 457 63.5
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 1.3e-150 537.0 423 66.4
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 2.8e-150 535.8 436 63.8
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 1.1e-149 533.9 444 63.5
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 4.1e-149 531.9 435 63.4
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 1.5e-148 530.0 443 63.4
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.0e-148 529.6 390 68.5
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 2.6e-148 529.3 421 65.3
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 3.4e-148 528.9 436 62.8
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 4.5e-148 528.5 443 60.9
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 5.9e-148 528.1 421 65.1
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 1.3e-147 526.9 429 64.3
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 1.3e-147 526.9 430 63.0
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 6.5e-147 524.6 439 62.2
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 2.5e-146 522.7 436 63.1
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 3.2e-146 522.3 428 63.8
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 4.2e-146 521.9 448 61.4
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 5.5e-146 521.5 443 60.7
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 7.2e-146 521.2 407 66.6
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 9.4e-146 520.8 437 62.0
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.2e-145 520.4 437 62.7
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 1.2e-145 520.4 436 62.6
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 2.1e-145 519.6 434 63.1
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 2.1e-145 519.6 423 64.5
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 6.1e-145 518.1 438 62.3
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 7.9e-145 517.7 445 60.9
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 6.7e-144 514.6 436 63.1
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 1.5e-143 513.5 437 62.0
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 4.3e-143 511.9 424 63.2
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 3.7e-142 508.8 407 64.9
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 2.4e-141 506.1 426 61.7
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 3.1e-141 505.8 346 74.9
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 1.2e-140 503.8 418 61.5
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 1.2e-140 503.8 457 59.1
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 2.0e-140 503.1 418 61.0
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 2.6e-140 502.7 437 59.0
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 4.5e-140 501.9 411 62.8
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 4.5e-140 501.9 411 62.8
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 5.9e-140 501.5 430 61.2
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 1.3e-139 500.4 436 61.9
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 1.7e-139 500.0 358 70.9
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 3.8e-139 498.8 388 66.5
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 1.9e-138 496.5 433 61.0
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 2.5e-138 496.1 443 59.1
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 4.2e-138 495.4 437 59.5
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 5.5e-138 495.0 563 49.2
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.2e-137 493.8 552 49.8
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.1e-137 493.0 440 59.8
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 3.0e-136 489.2 416 61.3
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 8.8e-136 487.6 406 61.1
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 1.1e-135 487.3 419 60.1
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 2.6e-135 486.1 348 70.1
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 3.1e-133 479.2 386 63.2
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.9e-130 469.9 355 66.5
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 4.7e-129 465.3 358 67.6
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 2.3e-128 463.0 388 60.1
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 4.8e-126 455.3 405 60.5
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 4.5e-124 448.7 399 62.2
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 6.5e-123 444.9 333 67.3
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 3.6e-121 439.1 425 57.4
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 5.2e-120 435.3 647 43.0
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 6.3e-118 428.3 366 58.7
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 1.2e-116 424.1 306 69.9
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 8.5e-115 417.9 424 54.2
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 2.7e-113 412.9 408 52.9
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 1.0e-112 411.0 447 52.6
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 4.8e-110 402.1 350 58.9
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 3.1e-109 399.4 417 50.8
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 5.4e-109 398.7 440 48.9
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 2.9e-107 392.9 429 48.5
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 8.9e-104 381.3 291 66.0
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 2.0e-103 380.2 286 67.5
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 2.6e-103 379.8 296 67.6
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 2.0e-100 370.2 315 61.3
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 2.8e-97 359.8 281 66.2
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 9.8e-87 324.7 299 57.5
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 2.2e-86 323.6 248 66.5
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 6.6e-83 312.0 304 54.9
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 8.6e-83 311.6 447 41.6
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 1.2e-71 274.6 427 38.9
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 4.4e-71 272.7 194 69.1
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 6.2e-65 252.3 214 64.0
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 2.2e-62 243.8 456 36.4
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 5.4e-61 239.2 205 58.0
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.9e-50 204.1 157 70.1
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 2.6e-47 193.7 180 59.4
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 3.2e-45 186.8 124 74.2
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.1e-40 170.2 149 57.7
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 1.4e-37 161.4 101 79.2
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 2.5e-37 160.6 346 32.7
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 1.1e-32 145.2 110 70.0
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 1.1e-32 145.2 110 70.0
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 8.5e-30 135.6 94 68.1
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 6.7e-27 125.9 99 63.6
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.4e-16 91.7 115 44.3
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 4.5e-15 86.7 62 64.5
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 1.9e-13 81.3 103 45.6
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 7.2e-13 79.3 51 72.5
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 2.0e-10 71.2 120 35.8
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 1.4e-08 65.1 46 67.4


User provided reference genes

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