Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 0.0e+00 1081.6 542 100.0
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 5.7e-279 963.8 542 89.1
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.7e-270 935.6 542 86.9
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 3.2e-266 921.4 547 85.7
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 9.2e-253 876.7 539 81.6
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 3.9e-195 685.3 542 67.3
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 3.7e-185 652.1 564 59.4
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 4.1e-184 648.7 548 60.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 5.0e-182 641.7 597 56.3
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 2.5e-181 639.4 539 60.7
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 2.5e-178 629.4 607 55.8
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 3.3e-178 629.0 544 59.7
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 9.7e-178 627.5 371 83.8
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.8e-176 623.2 638 53.6
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.5e-175 620.2 545 58.9
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.0e-175 619.8 568 56.9
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 5.0e-174 615.1 620 54.4
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.1e-173 614.0 562 56.8
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 5.5e-173 611.7 573 56.9
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.2e-172 610.5 561 57.0
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.8e-171 606.7 566 56.4
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 3.0e-171 605.9 563 56.3
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.3e-169 600.5 560 55.2
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 1.3e-169 600.5 583 55.2
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.7e-169 600.1 560 55.4
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.7e-169 600.1 538 58.2
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 2.2e-169 599.7 563 56.3
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 4.1e-168 595.5 561 54.5
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.2e-167 594.0 557 56.0
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 1.6e-167 593.6 560 55.4
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 4.5e-167 592.0 562 55.5
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.0e-166 590.9 566 55.7
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.3e-166 590.5 563 56.1
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.7e-166 590.1 580 55.0
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 2.2e-166 589.7 556 56.1
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 5.0e-166 588.6 575 55.0
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 5.5e-165 585.1 561 55.6
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 2.1e-164 583.2 536 56.9
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 2.7e-164 582.8 563 54.5
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.8e-163 580.1 545 57.4
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 3.0e-163 579.3 537 56.6
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 5.2e-163 578.6 541 56.2
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 5.2e-163 578.6 559 54.6
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 5.2e-163 578.6 546 55.9
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 8.8e-163 577.8 535 56.6
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.5e-162 577.0 541 56.0
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.7e-161 573.5 535 56.1
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.7e-161 573.5 540 55.7
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 4.8e-161 572.0 541 56.0
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 4.8e-161 572.0 538 55.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 3.1e-160 569.3 550 54.4
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 7.0e-160 568.2 545 55.4
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 5.9e-159 565.1 556 54.3
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 5.9e-159 565.1 542 55.4
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 3.6e-156 555.8 537 53.4
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 2.6e-154 549.7 579 52.5
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 4.4e-154 548.9 562 52.0
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 9.8e-154 547.7 606 51.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 3.7e-153 545.8 606 51.0
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 3.1e-152 542.7 573 51.3
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.9e-150 536.2 575 49.7
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.5e-146 523.9 570 50.7
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 9.8e-146 521.2 564 51.4
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 2.4e-144 516.5 568 48.8
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 5.6e-141 505.4 502 52.4
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.1e-140 503.4 508 52.4
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 1.0e-139 501.1 509 53.2
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 4.0e-139 499.2 496 52.8
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.0e-138 496.9 519 52.0
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 4.1e-136 489.2 549 49.4
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 2.3e-134 483.4 412 59.7
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.1e-133 481.1 523 51.8
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 7.3e-133 478.4 562 48.2
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.2e-132 477.6 556 49.5
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.2e-124 451.1 494 48.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.2e-113 413.7 506 46.2
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 2.4e-112 410.2 340 59.1
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 6.0e-111 405.6 559 42.9
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.6e-106 390.2 441 48.5
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 9.6e-101 371.7 597 37.7
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.1e-100 370.5 530 40.9
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 7.6e-98 362.1 371 55.0
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 3.8e-89 333.2 432 45.4
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 3.2e-88 330.1 286 58.7
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.6e-87 327.8 285 59.6
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.6e-87 327.8 351 51.3
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 7.9e-87 325.5 282 58.2
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 3.0e-86 323.6 370 51.1
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.1e-75 288.5 289 55.0
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 5.7e-69 266.2 218 61.0
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.2e-66 258.5 420 39.0
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 3.7e-60 236.9 246 53.3
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 1.0e-49 202.2 240 45.0
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 4.2e-48 196.8 214 51.4
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 4.5e-42 176.8 185 53.5
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.7e-39 167.5 123 61.8
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 6.1e-39 166.4 189 48.1
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 6.1e-39 166.4 189 48.1
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 4.4e-37 160.2 197 46.2
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 5.4e-35 153.3 104 66.3
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.3e-33 148.7 117 55.6
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.2e-31 142.1 194 44.8
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.1e-31 141.4 171 50.3
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 4.1e-27 127.1 146 51.4
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 2.7e-26 124.4 98 61.2
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.7e-12 77.4 88 48.9
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 1.3e-09 68.9 133 33.8
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 9.5e-08 62.8 320 21.9


User provided reference genes

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