Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 3.6e-202 708.0 349 100.0
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.7e-181 638.6 349 89.1
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.8e-180 636.0 349 88.0
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 5.1e-180 634.4 349 88.5
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 9.0e-169 597.0 351 84.6
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.0e-167 593.6 351 84.3
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 6.5e-167 590.9 349 82.5
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 4.8e-138 495.0 348 68.4
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.1e-137 493.8 346 68.8
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.2e-136 490.3 340 70.6
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.0e-135 487.3 340 68.5
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.2e-133 480.3 347 68.0
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.8e-132 476.5 342 67.0
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.0e-131 473.0 345 67.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 2.6e-131 472.6 340 67.9
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 4.4e-131 471.9 334 67.7
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 5.7e-131 471.5 351 67.5
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 9.8e-131 470.7 329 69.3
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 6.3e-130 468.0 333 67.3
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 2.4e-129 466.1 341 65.4
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 4.1e-129 465.3 331 67.7
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 9.1e-129 464.2 339 65.5
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.2e-128 463.8 327 68.5
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 2.7e-128 462.6 340 65.6
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 2.7e-128 462.6 342 65.2
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 3.5e-128 462.2 333 67.3
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 5.9e-128 461.5 343 65.9
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.9e-127 459.1 347 64.6
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 3.8e-127 458.8 339 65.2
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 6.5e-127 458.0 323 66.3
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 6.5e-127 458.0 323 66.6
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 8.5e-127 457.6 331 64.4
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.1e-126 457.2 332 65.1
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 5.5e-126 454.9 338 66.0
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 8.0e-125 451.1 343 64.7
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.0e-124 450.7 340 65.0
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 1.4e-124 450.3 340 65.6
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 3.0e-124 449.1 344 62.8
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 3.0e-124 449.1 342 62.6
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 4.0e-124 448.7 326 65.3
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.0e-124 448.7 347 64.0
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 5.2e-124 448.4 325 64.6
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 1.2e-123 447.2 344 64.2
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 2.6e-123 446.0 341 62.2
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 4.4e-123 445.3 346 61.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 3.7e-122 442.2 334 64.7
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.1e-121 440.7 341 63.9
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.4e-121 440.3 345 63.8
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.4e-121 440.3 345 63.8
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 1.4e-121 440.3 347 62.2
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 2.4e-121 439.5 347 62.0
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 3.1e-121 439.1 334 63.8
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 5.4e-121 438.3 357 62.5
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 3.5e-120 435.6 349 61.6
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 3.5e-120 435.6 357 62.2
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 7.8e-120 434.5 333 65.2
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.0e-119 434.1 331 60.7
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 8.6e-119 431.0 349 61.0
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 1.9e-118 429.9 348 60.1
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.3e-118 429.1 329 62.6
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 3.3e-118 429.1 339 59.3
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 3.3e-118 429.1 334 62.6
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.0e-116 424.1 312 65.7
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.4e-116 423.7 328 63.4
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 1.4e-116 423.7 355 60.3
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 2.3e-116 422.9 350 60.3
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 6.8e-116 421.4 334 60.2
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.2e-115 420.6 345 60.0
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 1.2e-115 420.6 328 61.6
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 2.0e-115 419.9 333 60.4
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.6e-115 419.5 330 61.2
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.4e-115 419.1 353 57.5
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 4.4e-115 418.7 324 61.7
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.3e-114 417.2 331 61.6
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 2.9e-114 416.0 328 61.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 8.3e-114 414.5 328 62.5
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.4e-113 413.7 332 61.1
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 1.8e-113 413.3 328 62.2
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 7.0e-113 411.4 345 60.6
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 1.6e-112 410.2 351 57.0
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.3e-111 407.1 301 65.8
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 1.3e-111 407.1 291 67.4
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 3.9e-111 405.6 322 60.9
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 8.6e-111 404.4 322 61.5
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 8.6e-111 404.4 291 65.6
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.4e-108 397.1 307 62.5
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 5.2e-108 395.2 337 59.9
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 8.9e-108 394.4 349 59.6
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 4.4e-107 392.1 352 56.2
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.9e-105 386.7 284 64.1
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 8.6e-103 377.9 343 57.4
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 8.1e-101 371.3 329 57.8
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 2.3e-100 369.8 250 68.4
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.5e-99 367.1 353 53.3
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 2.3e-92 343.2 260 65.4
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 3.4e-91 339.3 284 56.3
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.7e-90 337.0 250 60.8
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 1.1e-86 324.3 325 49.5
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.1e-84 317.8 323 51.1
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 2.3e-79 300.1 215 69.3
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 5.1e-79 298.9 261 57.9
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 9.6e-78 294.7 250 59.2
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 1.3e-77 294.3 461 37.5
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.4e-75 286.2 304 51.3
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-74 284.3 312 50.3
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 1.1e-73 281.2 325 47.7
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.4e-73 280.0 303 52.5
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.7e-72 276.6 276 49.3
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 3.9e-71 272.7 222 61.7
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 2.2e-66 256.9 226 59.3
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.1e-65 254.6 225 61.3
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 3.5e-64 249.6 420 35.2
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 6.5e-58 228.8 331 38.1
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.4e-52 211.1 156 64.7
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 1.5e-51 207.6 385 36.9
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.2e-49 199.5 152 64.5
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 5.7e-46 189.1 125 71.2
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 6.3e-45 185.7 122 68.9
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 8.5e-42 175.3 368 33.7
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 5.5e-41 172.6 310 36.8
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.2e-40 171.4 172 55.8
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 6.1e-40 169.1 125 60.8
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 2.6e-38 163.7 112 74.1
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 7.7e-35 152.1 123 54.5
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.1e-28 129.8 85 65.9
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 4.2e-25 119.8 173 46.2
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 7.2e-25 119.0 83 61.4
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.0e-18 98.6 60 75.0
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.7e-18 97.8 65 66.2
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 2.7e-16 90.5 56 83.9
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 2.7e-16 90.5 119 47.9
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 4.7e-08 63.2 241 28.6


User provided reference genes

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