Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-40 168.7 85 100.0
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-36 155.2 84 95.2
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 2.4e-30 135.2 83 79.5
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-30 133.3 83 78.3
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-30 133.3 83 78.3
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-30 133.3 83 78.3
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-30 133.3 83 78.3
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-29 132.1 83 77.1
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-29 132.1 83 77.1
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-29 131.7 83 77.1
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-28 128.6 83 75.9
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 4.9e-28 127.5 83 74.7
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 9.3e-27 123.2 74 82.4
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-26 122.9 74 83.8
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.0e-25 119.8 74 81.1
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-23 111.3 83 69.9
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 4.9e-20 100.9 82 64.6
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 8.4e-20 100.1 82 63.4
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 1.1e-19 99.8 82 63.4
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 7.1e-19 97.1 83 57.8
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 6.0e-18 94.0 55 81.8
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 1.8e-17 92.4 55 80.0
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 3.9e-17 91.3 72 63.9
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 3.9e-17 91.3 72 63.9
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-16 89.4 82 59.8
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-16 89.0 55 80.0
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-16 88.2 53 79.2
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 5.7e-16 87.4 55 78.2
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-15 85.5 55 76.4
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 4.2e-11 71.2 41 87.8
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 7.2e-11 70.5 45 82.2
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-09 66.2 55 61.8
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.4e-09 66.2 84 42.9
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 5.1e-09 64.3 84 44.0
CAN.G623.100 Capsicum annuum HOM05D002887 ORTHO05D003159 6.7e-09 63.9 37 83.8
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 6.7e-09 63.9 82 41.5
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 8.8e-09 63.5 83 44.6
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 1.1e-08 63.2 85 43.5
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 1.5e-08 62.8 82 39.0
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-08 62.8 55 60.0
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 2.5e-08 62.0 85 41.2
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 3.3e-08 61.6 84 42.9
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 3.3e-08 61.6 84 42.9
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 3.3e-08 61.6 84 40.5
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 4.3e-08 61.2 85 41.2
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 5.7e-08 60.8 84 41.7
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 7.4e-08 60.5 84 40.5
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 7.4e-08 60.5 80 46.2
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 9.7e-08 60.1 84 40.5
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 1.7e-07 59.3 84 39.3
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 1.7e-07 59.3 84 44.0
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.2e-07 58.9 84 41.7
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 3.7e-07 58.2 74 43.2
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 3.7e-07 58.2 82 39.0
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 6.3e-07 57.4 72 45.8
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 8.2e-07 57.0 85 41.2
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 8.2e-07 57.0 85 41.2
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 8.2e-07 57.0 55 52.7
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 8.2e-07 57.0 84 41.7
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 1.1e-06 56.6 84 36.9
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 2.4e-06 55.5 85 40.0
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 2.4e-06 55.5 85 40.0
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 2.4e-06 55.5 85 40.0
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 2.4e-06 55.5 85 40.0
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 5.3e-06 54.3 84 38.1
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 6.9e-06 53.9 73 41.1
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 6.9e-06 53.9 84 36.9
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 9.1e-06 53.5 85 41.2


User provided reference genes

Program Settings