Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 3.9e-59 231.5 136 100.0
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 7.8e-52 207.2 136 89.0
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 3.9e-51 204.9 136 78.7
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 5.1e-51 204.5 136 77.9
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 8.7e-51 203.8 136 78.7
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-50 203.0 136 78.7
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-50 203.0 136 86.8
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 4.3e-50 201.4 136 77.2
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 1.8e-48 196.1 135 85.9
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-42 176.4 103 86.4
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 9.6e-42 173.7 135 68.1
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-33 145.2 103 73.8
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-32 143.3 103 71.8
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-32 141.7 103 70.9
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-31 140.2 117 66.7
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-31 140.2 117 66.7
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-31 140.2 117 66.7
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-31 139.8 117 66.7
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 7.6e-31 137.5 117 65.8
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-30 136.3 117 65.0
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-29 133.3 117 64.1
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-29 132.9 117 64.1
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-28 130.2 117 63.2
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-26 122.1 137 65.7
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-22 109.8 135 50.4
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-22 109.8 135 50.4
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 5.0e-22 108.2 102 55.9
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-21 106.7 81 65.4
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-21 105.9 99 55.6
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 4.2e-21 105.1 102 53.9
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 3.0e-19 99.0 124 50.0
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 3.3e-18 95.5 102 53.9
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 9.7e-18 94.0 102 50.0
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 9.7e-18 94.0 102 52.9
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 2.5e-13 79.3 124 37.9
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 2.0e-10 69.7 81 43.2
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 4.4e-10 68.6 92 42.4
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 4.4e-10 68.6 92 42.4
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 4.4e-10 68.6 86 44.2
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 1.7e-09 66.6 90 43.3
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 2.2e-09 66.2 67 49.3
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 2.2e-09 66.2 92 42.4
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 2.2e-09 66.2 92 41.3
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 2.2e-09 66.2 87 46.0
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 2.8e-09 65.9 92 42.4
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 2.8e-09 65.9 92 42.4
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 3.7e-09 65.5 84 47.6
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 4.8e-09 65.1 116 36.2
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 4.8e-09 65.1 90 43.3
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 6.3e-09 64.7 92 41.3
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 6.3e-09 64.7 92 41.3
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 6.3e-09 64.7 92 41.3
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 6.3e-09 64.7 92 41.3
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 6.3e-09 64.7 92 41.3
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 6.3e-09 64.7 92 42.4
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 8.2e-09 64.3 89 43.8
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 8.2e-09 64.3 90 40.0
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 1.1e-08 63.9 67 49.3
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.1e-08 63.9 70 47.1
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 1.1e-08 63.9 87 47.1
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 1.4e-08 63.5 92 39.1
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 1.4e-08 63.5 89 43.8
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 1.4e-08 63.5 102 38.2
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 2.4e-08 62.8 84 44.0
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 2.4e-08 62.8 87 43.7
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 3.1e-08 62.4 89 39.3
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 3.1e-08 62.4 88 38.6
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 3.1e-08 62.4 89 40.4
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 4.1e-08 62.0 87 39.1
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 4.1e-08 62.0 105 40.0
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 5.3e-08 61.6 63 52.4
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 5.3e-08 61.6 68 45.6
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 1.5e-07 60.1 84 42.9
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 1.5e-07 60.1 89 39.3
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 2.6e-07 59.3 67 50.7
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 4.5e-07 58.5 91 40.7
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 5.9e-07 58.2 55 52.7
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 1.3e-06 57.0 60 45.0
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 1.7e-06 56.6 125 32.8
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 2.2e-06 56.2 89 38.2
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 2.2e-06 56.2 60 45.0
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 3.8e-06 55.5 65 49.2
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 5.0e-06 55.1 60 45.0
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 5.0e-06 55.1 60 45.0
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 6.5e-06 54.7 60 45.0
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 8.5e-06 54.3 67 41.8


User provided reference genes

Program Settings