Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-61 240.0 136 100.0
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-55 219.9 136 93.4
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-55 219.5 136 85.3
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-55 218.8 136 83.8
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-55 218.8 136 85.3
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 7.6e-55 217.2 136 83.8
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-54 216.1 136 83.8
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-50 202.6 136 86.8
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-46 189.5 135 83.0
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 1.0e-43 180.3 107 87.9
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 5.1e-43 177.9 132 72.0
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 6.7e-35 151.0 107 75.7
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-33 146.4 107 72.9
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-32 140.6 134 61.9
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-32 140.6 134 61.9
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-32 140.6 134 61.9
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 9.0e-32 140.6 134 61.9
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-31 139.4 136 60.3
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 4.5e-31 138.3 134 61.2
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 1.0e-30 137.1 134 61.2
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-29 133.7 120 65.0
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-29 133.7 134 59.7
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 7.1e-29 131.0 134 59.0
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 3.0e-27 125.6 135 56.3
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 5.1e-27 124.8 136 64.0
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-26 122.5 132 56.1
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 4.1e-24 115.2 81 71.6
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-22 110.2 124 53.2
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.2e-22 109.4 102 58.8
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.9e-21 106.3 102 56.9
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 9.4e-21 104.0 124 54.0
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 7.9e-20 100.9 120 53.3
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 2.3e-19 99.4 120 52.5
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 1.9e-18 96.3 102 53.9
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 1.3e-14 83.6 124 41.1
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 6.7e-11 71.2 116 40.5
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 2.0e-10 69.7 95 45.3
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 2.0e-10 69.7 95 45.3
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 2.0e-10 69.7 90 43.3
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 2.6e-10 69.3 95 45.3
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 2.6e-10 69.3 116 38.8
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 2.6e-10 69.3 116 38.8
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 2.6e-10 69.3 116 38.8
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 2.6e-10 69.3 116 38.8
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 2.6e-10 69.3 116 38.8
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 2.6e-10 69.3 95 46.3
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 3.3e-10 68.9 97 44.3
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 5.7e-10 68.2 95 46.3
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 9.7e-10 67.4 55 61.8
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.3e-09 67.0 95 43.2
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.3e-09 67.0 95 43.2
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 3.7e-09 65.5 85 47.1
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 4.8e-09 65.1 95 43.2
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 6.3e-09 64.7 67 49.3
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 6.3e-09 64.7 102 40.2
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 8.2e-09 64.3 73 47.9
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 8.2e-09 64.3 119 37.0
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 1.1e-08 63.9 95 46.3
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 1.1e-08 63.9 95 43.2
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 1.4e-08 63.5 95 45.3
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 1.4e-08 63.5 95 41.1
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 1.8e-08 63.2 95 45.3
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 3.1e-08 62.4 55 61.8
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 3.1e-08 62.4 95 44.2
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 4.1e-08 62.0 95 40.0
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 9.1e-08 60.8 95 42.1
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 1.2e-07 60.5 115 40.9
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 1.2e-07 60.5 95 38.9
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 1.2e-07 60.5 111 39.6
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.2e-07 60.5 89 43.8
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 1.2e-07 60.5 95 41.1
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 2.0e-07 59.7 95 44.2
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 2.6e-07 59.3 90 42.2
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 4.5e-07 58.5 95 41.1
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 4.5e-07 58.5 73 43.8
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 5.9e-07 58.2 95 40.0
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 1.3e-06 57.0 66 53.0
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 1.7e-06 56.6 92 41.3
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 1.7e-06 56.6 95 45.3
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 2.9e-06 55.8 73 43.8
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 5.0e-06 55.1 92 38.0
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 5.0e-06 55.1 73 43.8
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 6.5e-06 54.7 67 44.8
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 6.5e-06 54.7 91 37.4
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 6.5e-06 54.7 95 40.0
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 6.5e-06 54.7 96 40.6


User provided reference genes

Program Settings